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The map label for this gene is ygiQ [C]

Identifier: 22127377

GI number: 22127377

Start: 3884989

End: 3886536

Strand: Reverse

Name: ygiQ [C]

Synonym: y3503

Alternate gene names: 22127377

Gene position: 3886536-3884989 (Counterclockwise)

Preceding gene: 22127378

Following gene: 22127376

Centisome position: 84.48

GC content: 51.74

Gene sequence:

>1548_bases
ATGAGTATCAGCTTGATCCAACCAGAGCGTGACCTGTTTTCTTATCAGCCTTATTGGGCTGAATGCTATGGCACCGCGCC
ATTCTTACCTATGTCACGGGAGGAAATGGACATATTGGGTTGGGACAGTTGCGATATCATTGTCATCACTGGTGATGCCT
ATGTTGACCACCCAAGCTTTGGTATGGCCATCGTTGGCCGTATGCTGGAAGCTCAGGGATTTCGGGTCGGGATTATTGCT
CAGCCAGATTGGACGAATAAACATGATTTTATGCGTCTGGGAGAGCCGAATCTGTTCTTTGGTGTCACGGCGGGCAATAT
GGATTCGATGATCAACCGCTATACGGCTGACCGAAAACTGCGCCACGATGATGCTTATACGCCGGATAACCAGAGTGGTA
AGCGGCCAGATCGCGCGACATTGGTGTATAGCCAACGCTGCAAAGAAGCCTATAGCCATGTGCCGGTATTACTGGGCGGC
ATCGAGGCCAGCCTGCGCCGTATTGCTCACTATGACTATTGGTCTGATACTGTGCGCCGCTCGGTGATCGTAGATGCTAA
AGCGGACATGCTGGTGTATGGCAATGGCGAACGGCCATTGGTGGAAGTGGCGCACCGTTTGGCTGCGGGTGAGAAAATTA
CGGATATTCAGGATGTCCGTAACACCGTTGTGATGCGTAAAACGCCCTTGCCGGGCTGGAGCGGGGTGGATTCTACCCGT
CTGGATAAACCGGGCCGTATTGAAGCCATTCCCAATCCTTACGGTGAAGACCTGCCGTGTGCGACCGATGACATATCGAT
ACCGGAGGCCAAACCAATAACCGTGCGTGCGGCCAAACCGAAGCCATGGGAAAAGACCTACGTTTTACTGCCTTCATATG
AAAAAGTGAAGGCGGACAAAGTGTTGTATGCCCATACCTCGCGGATTTTGCATCATGAAACTAATCCCGGTTGTGCGCGG
GCGTTGATGCAGAAACATGGCGATCGCTATATTTGGATTAACCCACCGGCGATCCCGCTAAGTACCGAAGAGATGGACAG
TGTATTTGCACTGCCTTATCAGCGCGTCCCGCACCCGTCCTACGGAAAATCGCCGATCCCGGCCTATGACATGATTCGTT
TTTCGATCAATATCATGCGCGGCTGTTATGGCGGTTGCTCCTTCTGCTCTATTACGGAGCATGAAGGGCGCATTATTCAG
AGCCGCTCTGAAGATTCTATTATTCGTGAAATCGAAGAGATTCGCGATAAAGTCCCTGGTTTTACCGGTATTATCTCTGA
TCTTGGCGGGCCTACCGCGAATATGTATATGCTGCGCTGCCAGTCCCCTCGGGCTGAACAAACCTGCCGCCGGGCGTCTT
GTGTGTATCCTGAGATTTGCCCGCACATGGATACCAACCATCAACCGACGATCTCTTTGTACCGTCGAGCCCGTGATTTG
AAAGGGATCAAAAAGATCCTGATCGCCTCCGGCGTTCGCTACGATTTGGCAGTAGAAGATCCGCGTTATATCAAAGAGTT
GGCCAGCCACATGTGGGCGGTTATTTGA

Upstream 100 bases:

>100_bases
TATCCTTCCTCTTCACATGGATAACTGCGTATAATCGCCGGCCGGTGATGATTTCTTAACCCGAACCACCTCAACTTTCC
CCCTATTAAAGAGTGTTGCC

Downstream 100 bases:

>100_bases
AAATCGCACCAGAGCATACTGAGGAAGGGCCGCTTTCTAAAATGATGAAACCGGGTATGGGCAGCTATCAGCGCTTCAAG
GAACTGTTTGATACTTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIA
QPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGG
IEASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCAR
ALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQ
SRSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
KGIKKILIASGVRYDLAVEDPRYIKELASHMWAVI

Sequences:

>Translated_515_residues
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIA
QPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGG
IEASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCAR
ALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQ
SRSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
KGIKKILIASGVRYDLAVEDPRYIKELASHMWAVI
>Mature_514_residues
SISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSFGMAIVGRMLEAQGFRVGIIAQ
PDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGI
EASLRRIAHYDYWSDTVRRSVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTRL
DKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADKVLYAHTSRILHHETNPGCARA
LMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPSYGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQS
RSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDLK
GIKKILIASGVRYDLAVEDPRYIKELASHMWAVI

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=512, Percent_Identity=83.984375, Blast_Score=919, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 58259; Mature: 58128

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSF
CCCEEECCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEECCCCH
GMAIVGRMLEAQGFRVGIIAQPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHCHH
RHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGIEASLRRIAHYDYWSDTVRR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHH
SVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
EEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCC
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADK
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHCC
VLYAHTSRILHHETNPGCARALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPS
EEEEHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCHHHCCCCC
YGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC
FTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHH
KGIKKILIASGVRYDLAVEDPRYIKELASHMWAVI
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SISLIQPERDLFSYQPYWAECYGTAPFLPMSREEMDILGWDSCDIIVITGDAYVDHPSF
CCEEECCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEECCCEECCCCH
GMAIVGRMLEAQGFRVGIIAQPDWTNKHDFMRLGEPNLFFGVTAGNMDSMINRYTADRKL
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHCHH
RHDDAYTPDNQSGKRPDRATLVYSQRCKEAYSHVPVLLGGIEASLRRIAHYDYWSDTVRR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHH
SVIVDAKADMLVYGNGERPLVEVAHRLAAGEKITDIQDVRNTVVMRKTPLPGWSGVDSTR
EEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCC
LDKPGRIEAIPNPYGEDLPCATDDISIPEAKPITVRAAKPKPWEKTYVLLPSYEKVKADK
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHCC
VLYAHTSRILHHETNPGCARALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVPHPS
EEEEHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCHHHCCCCC
YGKSPIPAYDMIRFSINIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPG
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCC
FTGIISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICPHMDTNHQPTISLYRRARDL
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHH
KGIKKILIASGVRYDLAVEDPRYIKELASHMWAVI
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]