| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is iucA1 [H]
Identifier: 22127256
GI number: 22127256
Start: 3725640
End: 3726248
Strand: Direct
Name: iucA1 [H]
Synonym: y3380
Alternate gene names: 22127256
Gene position: 3725640-3726248 (Clockwise)
Preceding gene: 22127255
Following gene: 22127257
Centisome position: 80.98
GC content: 50.41
Gene sequence:
>609_bases ATGACTATCCCAGTAGAAACCTTAGCAACCGATGTGGCTGCTCAATGTTTCCTCAACGCGCTGATTCGTGAAACCCAGGA CTGGCAGATCGTTCCGGCAGCGGGCCACCAACCGTACCCACAACTCCACATTCCTCTTTCTTCTTCACACGCTATCCACA TTGCCTTATGCCATATCTCCCCAACACAGCATCATCACTATCTGTTCCCTGCCTACCTGCATCAGCAGGGTAATGATAGG CAGGATGATGACACCCCGGTAAAACTCGGGATCGAACAGTTGGTGACGCTTCTGTTGGAGAAGCCAACGGTAAAAGGTGA GCTGTCTGATGATGTGGTTGCTCGTTTCCGTCAACGGGTGCTAGAAAGTCATGATAATACTCAGCAAGCGATTAATATTC GTCTGGATTGGCCGTCATTACGCGATAAACCACTTAATTTTGCCCAGGCAGAACAAGGATTACTGGCCGGCCATGCCTTT CACCCGGCACCGAAATCCCATCAACCTTTTAATGAAAAACAGGCCCAGCGTTATCTCCCGATTTTGCCTCCCGCTTCCCA CTACGCTGGTTTGCAGTCGATAAACGCTACCTGTGCGGCGATAGCCTAA
Upstream 100 bases:
>100_bases AAGGAGATTTATTGAAAAATTGTATCATATTCCAATTGATAATGATAACCACTATTGATATAAGAATCGTTCTCAATGGA TTAATAAGCGACATGACATC
Downstream 100 bases:
>100_bases AGCTAACGCTACAACACCGGCTGCAACGCTTTGCCAGCGAAAGCGCCCCACAATTACTCGCGCATTTTACCGATGACGTT TGGCTGCTCCCCATGCACCC
Product: aerobactin synthetase (subunit alpha)
Products: ADP; phosphate; aerobactin
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHISPTQHHHYLFPAYLHQQGNDR QDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRVLESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAF HPAPKSHQPFNEKQAQRYLPILPPASHYAGLQSINATCAAIA
Sequences:
>Translated_202_residues MTIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHISPTQHHHYLFPAYLHQQGNDR QDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRVLESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAF HPAPKSHQPFNEKQAQRYLPILPPASHYAGLQSINATCAAIA >Mature_201_residues TIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHISPTQHHHYLFPAYLHQQGNDRQ DDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRVLESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAFH PAPKSHQPFNEKQAQRYLPILPPASHYAGLQSINATCAAIA
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: 6.3.2.27
Molecular weight: Translated: 22534; Mature: 22403
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHIS CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECC PTQHHHYLFPAYLHQQGNDRQDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRV CCCCCCEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAFHPAPKSHQPFNEKQAQRYLP HHCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHCCC ILPPASHYAGLQSINATCAAIA CCCCCHHHHHHHHCCCCCEECC >Mature Secondary Structure TIPVETLATDVAAQCFLNALIRETQDWQIVPAAGHQPYPQLHIPLSSSHAIHIALCHIS CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECC PTQHHHYLFPAYLHQQGNDRQDDDTPVKLGIEQLVTLLLEKPTVKGELSDDVVARFRQRV CCCCCCEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LESHDNTQQAINIRLDWPSLRDKPLNFAQAEQGLLAGHAFHPAPKSHQPFNEKQAQRYLP HHCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHCCC ILPPASHYAGLQSINATCAAIA CCCCCHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; citrate; N6-acetyl-N6-hydroxylysine
Specific reaction: 4 ATP + citrate + N6-acetyl-N6-hydroxylysine = 4 ADP + 4 phosphate + aerobactin
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8003107 [H]