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The map label for this gene is yajD [H]

Identifier: 22126887

GI number: 22126887

Start: 3319081

End: 3319434

Strand: Direct

Name: yajD [H]

Synonym: y3010

Alternate gene names: 22126887

Gene position: 3319081-3319434 (Clockwise)

Preceding gene: 22126872

Following gene: 22126889

Centisome position: 72.14

GC content: 42.37

Gene sequence:

>354_bases
TTGAAGGCTCATATGGCATATATACCAAAGAATTATTCCCGATTGGAAAGCGGTTATCGGGAGAAGGCACTGAAAATTTT
CCCCTGGGTTTGTGGTAAATGCTCACGGGAGTTTGTCTATTCCAATCTGCGAGAGCTAACGGTTCATCATATTGATCATG
ACCACGGTAATAACCCAGAAGATGGCAGCAATTGGGAGATGTTATGCCTGTTTTGTCACGATCATGAGCATTCCAAATAT
ACAGAGGTGGATTTATACGGCTCAACCGTGGTTGCCGGAGATGATGCACAAAAGGATCAAGGCGTCGCCACCCATAACCC
ATTTGCTAATTTGAAATCTTTAATGAAAAAATAA

Upstream 100 bases:

>100_bases
AACGCGCTAATGGCGTGTTGGCGTTTGAGTATTTATCCTCAATAGTCGATAGTCCGACGCCCACTTTCGCGCTAAAATAA
GCAGCATATTTTTCGCAGAA

Downstream 100 bases:

>100_bases
TCTGTGCGGCTCGTCTTTCTGACGGCTAAAAACCCAATAGTTGCCGATATGAACGAGGTTCTTGTTGATCAACCTGTAAC
CCGAACGTATTGGCAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKAHMAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSNWEMLCLFCHDHEHSKY
TEVDLYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK

Sequences:

>Translated_117_residues
MKAHMAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSNWEMLCLFCHDHEHSKY
TEVDLYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK
>Mature_117_residues
MKAHMAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPEDGSNWEMLCLFCHDHEHSKY
TEVDLYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=113, Percent_Identity=82.3008849557522, Blast_Score=209, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 13483; Mature: 13483

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHMAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
DGSNWEMLCLFCHDHEHSKYTEVDLYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK
CCCCEEEEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKAHMAYIPKNYSRLESGYREKALKIFPWVCGKCSREFVYSNLRELTVHHIDHDHGNNPE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
DGSNWEMLCLFCHDHEHSKYTEVDLYGSTVVAGDDAQKDQGVATHNPFANLKSLMKK
CCCCEEEEEEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]