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The map label for this gene is sxy [H]

Identifier: 22126611

GI number: 22126611

Start: 3017713

End: 3018435

Strand: Reverse

Name: sxy [H]

Synonym: y2733

Alternate gene names: 22126611

Gene position: 3018435-3017713 (Counterclockwise)

Preceding gene: 22126615

Following gene: 22126608

Centisome position: 65.61

GC content: 43.02

Gene sequence:

>723_bases
TTGCGTATTTTTGCAATTAGTTGTTCCTCTTACACTTATTGCTACAAGACAGGGACATTGGTTAGGATTTTTACTAAAGG
AGTAGTCATGAAAATCATGTCAGAAAAAAGGATCGCTCAAGCACAAGTTCGTTTTGGTTTTCTGGGGCAGATAACAATTC
GTTCCCAATTTGGGGGCTATGGTCTATTGGTTAATAGCATCATGTTCGCTGTTGTTTCGGAAGGTGAGCTTTATTTGCGT
GCTAACGATAATATTGAGGATTTATTCCGCGCCAGTGGGATGGCTAACCTTGTTTATGCTAAACGCGGGTTACCTGTCTT
GCTACGTTATTATCGGGTTGATACTTCATTATGGAATGATGGACTCAGATTACATCATTTCGTCCGGCAGGCTTATGAGG
GCGCGAAAATAGACGTTCTGAGTAAGAAAGGCCCAGTGGTACGGCTGAAGGATTTACCTAATCTTAGCGCCAGCCTTGAA
CGGCTATTATGGAAAGTGGGTATAAAGAATGCGACTGAATTACGCCTTGAAGGCGCTAAATGTTGCTACTTGAAATTACG
GGCGTTAAGGCGCTCTCTTGGGATTAATATTTTGCTGGCGTTGGCGGGGGCTATCAGTGGCTATCATTATGCTGCTTTGC
CTTTGATGATGCGCAGTGAGCTTATCGAATGGTTTGAAAAACACATCCATCCAGCAAAGGCTCCATTATATGAAACGGCA
TAA

Upstream 100 bases:

>100_bases
CACTGTTTAATCGAAGATCAACTAAATTTTATAAGACGCTTCGCATAATTGTGATGCAAATACATGTAAATCCATTTTAT
GTTTGGCTACGTAATCCATA

Downstream 100 bases:

>100_bases
TGGTGTGAGCCAGTGTAATGGGGTGAGTCAGCATAACTGTGTGAAACAGTATAACCGTATGAAACCGTATAATGGGCCAC
GATGGGTGGCCCTTGGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRIFAISCSSYTYCYKTGTLVRIFTKGVVMKIMSEKRIAQAQVRFGFLGQITIRSQFGGYGLLVNSIMFAVVSEGELYLR
ANDNIEDLFRASGMANLVYAKRGLPVLLRYYRVDTSLWNDGLRLHHFVRQAYEGAKIDVLSKKGPVVRLKDLPNLSASLE
RLLWKVGIKNATELRLEGAKCCYLKLRALRRSLGINILLALAGAISGYHYAALPLMMRSELIEWFEKHIHPAKAPLYETA

Sequences:

>Translated_240_residues
MRIFAISCSSYTYCYKTGTLVRIFTKGVVMKIMSEKRIAQAQVRFGFLGQITIRSQFGGYGLLVNSIMFAVVSEGELYLR
ANDNIEDLFRASGMANLVYAKRGLPVLLRYYRVDTSLWNDGLRLHHFVRQAYEGAKIDVLSKKGPVVRLKDLPNLSASLE
RLLWKVGIKNATELRLEGAKCCYLKLRALRRSLGINILLALAGAISGYHYAALPLMMRSELIEWFEKHIHPAKAPLYETA
>Mature_240_residues
MRIFAISCSSYTYCYKTGTLVRIFTKGVVMKIMSEKRIAQAQVRFGFLGQITIRSQFGGYGLLVNSIMFAVVSEGELYLR
ANDNIEDLFRASGMANLVYAKRGLPVLLRYYRVDTSLWNDGLRLHHFVRQAYEGAKIDVLSKKGPVVRLKDLPNLSASLE
RLLWKVGIKNATELRLEGAKCCYLKLRALRRSLGINILLALAGAISGYHYAALPLMMRSELIEWFEKHIHPAKAPLYETA

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=208, Percent_Identity=43.2692307692308, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 27156; Mature: 27156

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFAISCSSYTYCYKTGTLVRIFTKGVVMKIMSEKRIAQAQVRFGFLGQITIRSQFGGY
CEEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCH
GLLVNSIMFAVVSEGELYLRANDNIEDLFRASGMANLVYAKRGLPVLLRYYRVDTSLWND
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCHHEEHHHCCHHHHHHHHHHHHHHHHC
GLRLHHFVRQAYEGAKIDVLSKKGPVVRLKDLPNLSASLERLLWKVGIKNATELRLEGAK
CHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCH
CCYLKLRALRRSLGINILLALAGAISGYHYAALPLMMRSELIEWFEKHIHPAKAPLYETA
HHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRIFAISCSSYTYCYKTGTLVRIFTKGVVMKIMSEKRIAQAQVRFGFLGQITIRSQFGGY
CEEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCH
GLLVNSIMFAVVSEGELYLRANDNIEDLFRASGMANLVYAKRGLPVLLRYYRVDTSLWND
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCHHEEHHHCCHHHHHHHHHHHHHHHHC
GLRLHHFVRQAYEGAKIDVLSKKGPVVRLKDLPNLSASLERLLWKVGIKNATELRLEGAK
CHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCH
CCYLKLRALRRSLGINILLALAGAISGYHYAALPLMMRSELIEWFEKHIHPAKAPLYETA
HHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]