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The map label for this gene is yobA [H]

Identifier: 22126405

GI number: 22126405

Start: 2785462

End: 2786007

Strand: Reverse

Name: yobA [H]

Synonym: y2523

Alternate gene names: 22126405

Gene position: 2786007-2785462 (Counterclockwise)

Preceding gene: 22126406

Following gene: 22126404

Centisome position: 60.56

GC content: 45.24

Gene sequence:

>546_bases
TTGGTTATATTTCAACCACAACTTGGTTTTTGGCGTTTTATTTTGTGTACTCCCTCACAGGTAGTGCATTTGACTGGAAG
TGATAGGGGTTCATGCTGCCAATATAGGATATGGTTGGTAGTAGACGATTCTTCCCCCCATCGATTAAGGGACACTTATA
TGTTTATTCGTAAAGTACGCTCATCTTGCCGCATGTTGTCGGCTCTTATTGTGTTATTTGTTGGCCTTTCTAGCCAGCAA
GCGCTTGCTCATGCGCATTTAAAAGCGGAGACCCCGGCTGCAGATACCACTATAAATGCTGCACCTGAAGCCTTAACGTT
GGGCTTCTCTGAGGGCATTGAGCTGAACTTCAGTGGTGTTAAAGTCACGGGGCCGGATAATAATGTGGTCAAAACCGGTG
ATCTTAAATTGGATCCCGCGAATAACACCCAACTGATTTTGCCGATTGGCCATGCTTTAGCTGCTGGAAAATATCATGTC
TCATGGCACGTTGTCTCGGTTGATGGCCATAAGACGAAAGGCACTTACAGCTTCACTGTGAAATAG

Upstream 100 bases:

>100_bases
TGGTAGCATTTAGCTTGGCTATAGCCACTCGACTTGCTACATTCAAATCGTTATCATTTGTAATAACGGTAATGGAGTGA
GTTGAATTTTCATTCCTTTA

Downstream 100 bases:

>100_bases
ATATGTCTTTGGCGACTCTATTCATTCTGTGTCGCTTTCTGCACTTTATGGCAGTGATGCTGATGTTTGGCATCACTGTA
TTCACCGCCTTTTTGGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVIFQPQLGFWRFILCTPSQVVHLTGSDRGSCCQYRIWLVVDDSSPHRLRDTYMFIRKVRSSCRMLSALIVLFVGLSSQQ
ALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGVKVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHV
SWHVVSVDGHKTKGTYSFTVK

Sequences:

>Translated_181_residues
MVIFQPQLGFWRFILCTPSQVVHLTGSDRGSCCQYRIWLVVDDSSPHRLRDTYMFIRKVRSSCRMLSALIVLFVGLSSQQ
ALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGVKVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHV
SWHVVSVDGHKTKGTYSFTVK
>Mature_181_residues
MVIFQPQLGFWRFILCTPSQVVHLTGSDRGSCCQYRIWLVVDDSSPHRLRDTYMFIRKVRSSCRMLSALIVLFVGLSSQQ
ALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGVKVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHV
SWHVVSVDGHKTKGTYSFTVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=122, Percent_Identity=50.8196721311475, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 19835; Mature: 19835

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIFQPQLGFWRFILCTPSQVVHLTGSDRGSCCQYRIWLVVDDSSPHRLRDTYMFIRKVR
CEEECCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHH
SSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGV
HHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCEECCCCCEEEEECCCCEEEEECCE
KVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTKGTYSFTV
EEECCCCCEEEECCEEECCCCCCEEEEEECCHHCCCEEEEEEEEEEECCCCCCCEEEEEE
K
C
>Mature Secondary Structure
MVIFQPQLGFWRFILCTPSQVVHLTGSDRGSCCQYRIWLVVDDSSPHRLRDTYMFIRKVR
CEEECCCCCEEEEEEECCCEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHH
SSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGV
HHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCEECCCCCEEEEECCCCEEEEECCE
KVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTKGTYSFTV
EEECCCCCEEEECCEEECCCCCCEEEEEECCHHCCCEEEEEEEEEEECCCCCCCEEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]