| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is ftn [H]
Identifier: 22126406
GI number: 22126406
Start: 2786245
End: 2786865
Strand: Reverse
Name: ftn [H]
Synonym: y2524
Alternate gene names: 22126406
Gene position: 2786865-2786245 (Counterclockwise)
Preceding gene: 22126408
Following gene: 22126405
Centisome position: 60.57
GC content: 37.2
Gene sequence:
>621_bases ATGTTTTTTATAAATAATAATGTGAATAGAGCGTCTCTATTTTGTTTTTATCTTGGCATAATACACCAAGTTAATTATTT CTTGCCCATATCAAAAAGTAAGGGAATTATTATGTTAAAAAAAGAAATGGCACAAAAACTCAATGAGCAACTGAATCTGG AGTTTTACTCTGCGAATCTTTATCTGCAAATGAGTGCTTGGTGCAGCGATAAAGGTTTTGAAGGTGCGGCTGCCTTTTTA AAAAAGCATTCTCAAGAAGAAATGCAACATATGGAACGTTTGTTTGAATATCTCAGTGGAACTGGCTCTATGCCTGTACT GGGTACGATTACGGCTCCACCTGTAGATTTTGCATCATTAGCTGATGTATTCAAGCTTACGTATGAACATGAGCAATTAA TTACCACTCAAATCAATGAGCTTGCCCATGTTGCGATGACCACTCATGATTACTCCACATTCAATTTCCTACAGTGGTAT GTTGCTGAACAACATGAGGAAGAGAAACTGTTCAAATCTATTTTGGATAAACTGGCTCTGGTGGGTAATAGCGGTAATTC GTTGTTCTTCGTTGATAAAGATTTGAAAACAATGGCGGCCCAAGGCTACACGTCAGCTTAA
Upstream 100 bases:
>100_bases CTTATAAAATAATGTGAATGATTATCATGATGCTTTGGTATTTATTTTCATTTAATTTTATTGTTTATTTACAATTAGAT ATCAATAAGTTGAATGATTT
Downstream 100 bases:
>100_bases CCGGTATTGAGAAAATATTCGCCGCGGTACTATTATTGGGTACTGCGGCTTTGTTGTTGCCTATCCCTCCCCGCGATCCT CGCCTTTTCTTGTTTTTCTT
Product: ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFFINNNVNRASLFCFYLGIIHQVNYFLPISKSKGIIMLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFL KKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDFASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWY VAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKTMAAQGYTSA
Sequences:
>Translated_206_residues MFFINNNVNRASLFCFYLGIIHQVNYFLPISKSKGIIMLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFL KKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDFASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWY VAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKTMAAQGYTSA >Mature_206_residues MFFINNNVNRASLFCFYLGIIHQVNYFLPISKSKGIIMLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFL KKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDFASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWY VAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKTMAAQGYTSA
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=165, Percent_Identity=64.2424242424242, Blast_Score=233, Evalue=8e-63, Organism=Escherichia coli, GI1788212, Length=133, Percent_Identity=36.0902255639098, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 23514; Mature: 23514
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFINNNVNRASLFCFYLGIIHQVNYFLPISKSKGIIMLKKEMAQKLNEQLNLEFYSANL CEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHHHHHCEEEEEEEE YLQMSAWCSDKGFEGAAAFLKKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDFASL EEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHH ADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWYVAEQHEEEKLFKSILDKLAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH VGNSGNSLFFVDKDLKTMAAQGYTSA CCCCCCEEEEEECCHHHHHHCCCCCC >Mature Secondary Structure MFFINNNVNRASLFCFYLGIIHQVNYFLPISKSKGIIMLKKEMAQKLNEQLNLEFYSANL CEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEHHHHHHHHHHHHCEEEEEEEE YLQMSAWCSDKGFEGAAAFLKKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDFASL EEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHH ADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWYVAEQHEEEKLFKSILDKLAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH VGNSGNSLFFVDKDLKTMAAQGYTSA CCCCCCEEEEEECCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]