| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126372
Identifier: 22126372
GI number: 22126372
Start: 2751255
End: 2751623
Strand: Direct
Name: 22126372
Synonym: y2489
Alternate gene names: NA
Gene position: 2751255-2751623 (Clockwise)
Preceding gene: 22126371
Following gene: 22126373
Centisome position: 59.8
GC content: 42.55
Gene sequence:
>369_bases TTGCATCACGATTATCAACGCGTTTACGCTGCGTGCCCAGCGGGTGACTATTTTTTGCTCCGGAATAAGTGGGCCATTAT TTCTCAGAATTCATCGCCACACATCACACACATATGCATTGTAACAGATACGAATTGTGTGTATTGTGTGTATGTTTGGC GTATCAGCAAATCACAAGGAGTTAGAGTGAAAAGTTCGGAGCTGATAAAACTGCTCGAAACAAATGGTTGGAAGTTGATG AGAGTTAAAGGCAGTCATCATCAATTCAAACATCCTGATTTCGCGGCAGTCATAACAGTACCGCATCCCAAAAAGGATGT TAAACCGGGAACCCTCCGGCAAATTCTGAAAGATGCAAACCTTAGTTAA
Upstream 100 bases:
>100_bases TGTTAGCCCCTTTCACCGAACACCTGTTTAGTGAATTCTTCGACCGCCTGGCCGAGGTATTAAGCGGCATGGCAAACTGA TAGCGAGAAAATGACGTTCA
Downstream 100 bases:
>100_bases CAAAGCGCCCTCTAGGGTGCTATTAAGCAACGCAGGAGTTTTATATGGCTATCTATCCCGCCTATGTTCACGTTGATAAT GATGGCTCGGCAAGCGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: YcfA-Like Protein
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MHHDYQRVYAACPAGDYFLLRNKWAIISQNSSPHITHICIVTDTNCVYCVYVWRISKSQGVRVKSSELIKLLETNGWKLM RVKGSHHQFKHPDFAAVITVPHPKKDVKPGTLRQILKDANLS
Sequences:
>Translated_122_residues MHHDYQRVYAACPAGDYFLLRNKWAIISQNSSPHITHICIVTDTNCVYCVYVWRISKSQGVRVKSSELIKLLETNGWKLM RVKGSHHQFKHPDFAAVITVPHPKKDVKPGTLRQILKDANLS >Mature_122_residues MHHDYQRVYAACPAGDYFLLRNKWAIISQNSSPHITHICIVTDTNCVYCVYVWRISKSQGVRVKSSELIKLLETNGWKLM RVKGSHHQFKHPDFAAVITVPHPKKDVKPGTLRQILKDANLS
Specific function: Unknown
COG id: COG1724
COG function: function code N; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13996; Mature: 13996
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHDYQRVYAACPAGDYFLLRNKWAIISQNSSPHITHICIVTDTNCVYCVYVWRISKSQG CCCCHHEEEEECCCCCEEEEECCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCC VRVKSSELIKLLETNGWKLMRVKGSHHQFKHPDFAAVITVPHPKKDVKPGTLRQILKDAN EEECHHHHHEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCC LS CC >Mature Secondary Structure MHHDYQRVYAACPAGDYFLLRNKWAIISQNSSPHITHICIVTDTNCVYCVYVWRISKSQG CCCCHHEEEEECCCCCEEEEECCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCC VRVKSSELIKLLETNGWKLMRVKGSHHQFKHPDFAAVITVPHPKKDVKPGTLRQILKDAN EEECHHHHHEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCC LS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA