| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126309
Identifier: 22126309
GI number: 22126309
Start: 2691565
End: 2692341
Strand: Reverse
Name: 22126309
Synonym: y2425
Alternate gene names: NA
Gene position: 2692341-2691565 (Counterclockwise)
Preceding gene: 22126310
Following gene: 22126308
Centisome position: 58.52
GC content: 50.06
Gene sequence:
>777_bases ATGCTGACAAAGCTTACCGTCGAAACAGCGTTAAATGCCGAGCTTACCGAACACCTCGGGCACGAGAAAAATACCCCCAA AACAGGCTCAAATACTCGCAATGGTTACTCGTCTAAAACGTTGCTGTGCGACGATGGCGAGATTGAACTCAGCACGCCCC GTGACAGTGAAAACACCTTCGAGCCTAAGCTAATAAAGAAAAACCAGACGCGCATCACGCAGATGGACAGCCAGATTTTA TCCCTGTACGCCAAAGGCATGACCACGCGGGAAATCGTCGCCACCTTCAAGGAGATGTACGACGCTGACGTGTCGCCCAC ATTGATATCTAAAGTCACCGATGCGGTCAAAGAGCAGGTCACTGAGTGGCAAAATCGCCCTCTGGATGCGCTGTACCCCA TTGTTTATCTTGATTGCATTGTGGTAAAAGTTCGTCACAACGGCAGTGTAATTAACAAAGCCGTGTTCCTCGCGTTGGGC ATTAATACCGAAGGCCAAAAGGAGCTATTGGGCATGTGGCTGGCCGAAAACGAAGGCGCGAAATTCTGGCTAAGTGTGCT GACAGAGCTTAAAAACCGGGGTCTGCAGGATATCCTGATTGCTTGTGTGGACGGTCTGAAAGGCTTCCCGGATGCGATAA ACAGCGTTTATCCGCAGACGCATATCCAGCTCTGCATCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATGGAAG GACTATAAAGCCGTCACCAGCGGTTTGAAAATGGTGTATCAGGCTCCGACACGCTGA
Upstream 100 bases:
>100_bases CGGAGACAGGCAAATTATGGACGAAAAGAAACTTAAAGCACTTGCGGCTGAACTGGCTAAAGGTCTTAAAACCGAAGCCG ACCTTAATGTATTTTCTCGT
Downstream 100 bases:
>100_bases TGGCGCTGGATAAGTTTGCGGAGGCCTGGGACGACAAATACCCAAAAATTAGCAAAATTTGGCGTACGCACTGGGAAAAT CTCAATACATTCTTCGGCTA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELSTPRDSENTFEPKLIKKNQTRITQMDSQIL SLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALYPIVYLDCIVVKVRHNGSVINKAVFLALG INTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK DYKAVTSGLKMVYQAPTR
Sequences:
>Translated_258_residues MLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELSTPRDSENTFEPKLIKKNQTRITQMDSQIL SLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALYPIVYLDCIVVKVRHNGSVINKAVFLALG INTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK DYKAVTSGLKMVYQAPTR >Mature_258_residues MLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELSTPRDSENTFEPKLIKKNQTRITQMDSQIL SLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRPLDALYPIVYLDCIVVKVRHNGSVINKAVFLALG INTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK DYKAVTSGLKMVYQAPTR
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 28998; Mature: 28998
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELSTPRDSENTF CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCC EPKLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQV CCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TEWQNRPLDALYPIVYLDCIVVKVRHNGSVINKAVFLALGINTEGQKELLGMWLAENEGA HHHHCCCHHHHHHHHHHHHHHEEEECCCCHHHHEEEEEECCCCCCHHHHHHHHHHCCCCH KFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH DYKAVTSGLKMVYQAPTR HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLTKLTVETALNAELTEHLGHEKNTPKTGSNTRNGYSSKTLLCDDGEIELSTPRDSENTF CCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCC EPKLIKKNQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQV CCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TEWQNRPLDALYPIVYLDCIVVKVRHNGSVINKAVFLALGINTEGQKELLGMWLAENEGA HHHHCCCHHHHHHHHHHHHHHEEEECCCCHHHHEEEEEECCCCCCHHHHHHHHHHCCCCH KFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH DYKAVTSGLKMVYQAPTR HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]