| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22126308
Identifier: 22126308
GI number: 22126308
Start: 2691227
End: 2691565
Strand: Reverse
Name: 22126308
Synonym: y2424
Alternate gene names: NA
Gene position: 2691565-2691227 (Counterclockwise)
Preceding gene: 22126309
Following gene: 22126306
Centisome position: 58.5
GC content: 47.49
Gene sequence:
>339_bases ATGGCGCTGGATAAGTTTGCGGAGGCCTGGGACGACAAATACCCAAAAATTAGCAAAATTTGGCGTACGCACTGGGAAAA TCTCAATACATTCTTCGGCTATCCGCCCGATATCCGCAAGGCCATCTACACCACGAATGCCATTGAGTCACTGAACAGTG TGATCCGGCAGGCGATAAAGAAACGCAAAGTATTCCCAACGGACGACTCGGTGCGGAAGGTTATTTATCTGGCTATCCGG GATGTTTCGAAAAAATGGAGTATGCCAATACAGAACTGGCGGTTGGCAATGAGTTGTTTTATTATCGAGTTTGGTGACCG CCTGAGCGATCACCTTTAA
Upstream 100 bases:
>100_bases TCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATGGAAGGACTATAAAGCCGTCACCAGCGGTTTGAAAATGGTG TATCAGGCTCCGACACGCTG
Downstream 100 bases:
>100_bases TACAGTGGCGGTTACACAGAATTATGGACAGACTCGGCTGAGGCTGTGTGAAATTTTTAAATATATTTATTAGGCATCAT TTTACATGATACGAAAAATA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MALDKFAEAWDDKYPKISKIWRTHWENLNTFFGYPPDIRKAIYTTNAIESLNSVIRQAIKKRKVFPTDDSVRKVIYLAIR DVSKKWSMPIQNWRLAMSCFIIEFGDRLSDHL
Sequences:
>Translated_112_residues MALDKFAEAWDDKYPKISKIWRTHWENLNTFFGYPPDIRKAIYTTNAIESLNSVIRQAIKKRKVFPTDDSVRKVIYLAIR DVSKKWSMPIQNWRLAMSCFIIEFGDRLSDHL >Mature_111_residues ALDKFAEAWDDKYPKISKIWRTHWENLNTFFGYPPDIRKAIYTTNAIESLNSVIRQAIKKRKVFPTDDSVRKVIYLAIRD VSKKWSMPIQNWRLAMSCFIIEFGDRLSDHL
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 13311; Mature: 13179
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDKFAEAWDDKYPKISKIWRTHWENLNTFFGYPPDIRKAIYTTNAIESLNSVIRQAIK CCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KRKVFPTDDSVRKVIYLAIRDVSKKWSMPIQNWRLAMSCFIIEFGDRLSDHL HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALDKFAEAWDDKYPKISKIWRTHWENLNTFFGYPPDIRKAIYTTNAIESLNSVIRQAIK CHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KRKVFPTDDSVRKVIYLAIRDVSKKWSMPIQNWRLAMSCFIIEFGDRLSDHL HCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]