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The map label for this gene is arnE [H]

Identifier: 22125815

GI number: 22125815

Start: 2116931

End: 2117293

Strand: Direct

Name: arnE [H]

Synonym: y1922

Alternate gene names: 22125815

Gene position: 2116931-2117293 (Clockwise)

Preceding gene: 22125814

Following gene: 161484818

Centisome position: 46.01

GC content: 49.86

Gene sequence:

>363_bases
GTGGTACCAGAAAACACCATGAACAGCTACCTACTCTTGCTGATGGTCAGTCTATTAACCTGTATTGGGCAATTATGTCA
AAAACAGGCTGCGCAGTGTTGGGAGCAACCGCAGGCCCGGCGGTTGAATCTGACATTGCGTTGGTTGGCGATAGCTGTAG
TGTCACTTGGCTTGGGGATGCTGTTGTGGCTGCGGTTATTGCAGCAACTCCCGCTGAGCGTGGCCTATCCTATGCTCAGC
TTTAATTTTGTGTTGGTTACCTTGGCGGCACAACTATTTTACGGTGAAAAGGCCACTCTTCGGCATTGGTTGGGGGTTGC
CGCTATTATGTTCGGTATCTTGCTAATGAGTTGGCACCTATGA

Upstream 100 bases:

>100_bases
GCGACGTCTCATTGGTCGTGCAATTAGCCAAAAATGAAGCACTCCCGGCCCATCTGCCGCCAGCGGATAAGGTGAATTTA
ATGAATCGACTCGCCCTGTT

Downstream 100 bases:

>100_bases
AAGGGTATCTGTGGGGGGGGGCAAGCGTCGTATTGGTCACGGTGGCACAGTTGGTGTTGAAGTGGGGTATGATGAATATT
CCATTATTATCACTAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnE; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE [H]

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MVPENTMNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLS
FNFVLVTLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL

Sequences:

>Translated_120_residues
MVPENTMNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLS
FNFVLVTLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL
>Mature_120_residues
MVPENTMNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLS
FNFVLVTLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI87082074, Length=108, Percent_Identity=50, Blast_Score=85, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR022883 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 13632; Mature: 13632

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPENTMNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LLWLRLLQQLPLSVAYPMLSFNFVLVTLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVPENTMNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LLWLRLLQQLPLSVAYPMLSFNFVLVTLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA