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The map label for this gene is F17a-A [H]

Identifier: 22125436

GI number: 22125436

Start: 1705756

End: 1706310

Strand: Direct

Name: F17a-A [H]

Synonym: y1539

Alternate gene names: 22125436

Gene position: 1705756-1706310 (Clockwise)

Preceding gene: 22125435

Following gene: 22125438

Centisome position: 37.08

GC content: 44.32

Gene sequence:

>555_bases
ATGAACGCAATGCGTAAATTAAATCTTGCTGTATGTGCAGTGGCTCTGTCTGTTATCTCTTCAACTTCTTATGCTGCTGC
TGGCGGTACTGTTACGTTCAACGGTAAATTGATTGCTGATACTTGTCAGGTTGATACCGCAAGCGAGAATATCACGGTAA
CACTGCCTACTCTTTCTATCCAGTCTTTGGCTGTAGCTGAAGCTCAAGATGGTTCTAAGGACTTTGAAATCAAAGTTCTG
GATTGCCCGGCAACACTGACTCAAGTCGGTGCCCATTTTAATGCGATTGATAGCTCTGGTGTTAATCCGGCAACCGGTAA
CTTGGTGAACAAAGCACCAACTGATGCTGCGGGTAATGTTGAAGTGCGTTTGTACAACGTTGATGACAGCAGCCAGATCC
GTGTAGGTTCAACGGGTAACATGGTCAACATCGTCAAAGTAGGTGCTACACCAGGTACAGCTAATCTGACCTATGCTGGT
GGTTATTATGCAACAGATGCAACTACCCCAGGTGAAGTGAATGCTAAAGTTGAATACGTTTTAGCTTATAACTAA

Upstream 100 bases:

>100_bases
TGCTATTTCTTGAGAAAAGAAAGGCAATAAAAAATAGCTAGTATTGGCATGAGCGAATATTAACTATATATTTAATAAAT
CTGGATTTTTAAATTAAAGG

Downstream 100 bases:

>100_bases
TCACCGATTAGGGTGATAGGCGTGTGGTCCACTTTATGTGGGTCACCGCAGCAGTAAAGCATAACAGCTTGCTGCCGAGG
CGGATAAAACGCTGCGGTAG

Product: frimbrial protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNAMRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSLAVAEAQDGSKDFEIKVL
DCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAG
GYYATDATTPGEVNAKVEYVLAYN

Sequences:

>Translated_184_residues
MNAMRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSLAVAEAQDGSKDFEIKVL
DCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAG
GYYATDATTPGEVNAKVEYVLAYN
>Mature_184_residues
MNAMRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSLAVAEAQDGSKDFEIKVL
DCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAG
GYYATDATTPGEVNAKVEYVLAYN

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081804, Length=175, Percent_Identity=33.1428571428571, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18883; Mature: 18883

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAMRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSI
CCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEECCEEEEEEEEECCCCCCEEEEECCCEE
QSLAVAEAQDGSKDFEIKVLDCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNV
EEEEEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
EVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAGGYYATDATTPGEVNAKVEYV
EEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCEEECCCCCCCCCCEEEEEE
LAYN
EEEC
>Mature Secondary Structure
MNAMRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSI
CCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEECCEEEEEEEEECCCCCCEEEEECCCEE
QSLAVAEAQDGSKDFEIKVLDCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNV
EEEEEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
EVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAGGYYATDATTPGEVNAKVEYV
EEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCEEECCCCCCCCCCEEEEEE
LAYN
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]