| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is bcp [H]
Identifier: 22125315
GI number: 22125315
Start: 1573250
End: 1573723
Strand: Reverse
Name: bcp [H]
Synonym: y1417
Alternate gene names: 22125315
Gene position: 1573723-1573250 (Counterclockwise)
Preceding gene: 229013130
Following gene: 22125310
Centisome position: 34.21
GC content: 44.3
Gene sequence:
>474_bases GTGATGAGCCCATTGAAAGCCGGTGATATAGCGCCGAAATTTAGTTTACCCGATCAAGATGGCGAGCAAATTAGTTTGGC CGACTTCCAGGGACAGCGTGTATTGGTTTATTTTTATCCTAAGGCCATGACACCTGGTTGTACCGTTCAGGCTTGTGGTC TGCGCGATAATATGGATGAACTGAAAAGTGCGGGGGTAGAAGTGCTGGGTATCAGCACCGATAAACCCGAAAAGCTGTCT CGTTTCGCTGAAAAAGAACTCTTAAACTTTACGCTTCTGTCTGATGAACATCATGAAGTTGCGGAACAATTTGGCGTCTG GGGCGAAAAGAGCTTTATGGGTAAAACCTACAATGGCATCCACCGTATCAGCTTCTTAATTGATGCTGACGGTAAGGTGG AACATGTGTTTGATAATTTCAAGACTAATAATCATCACGATATCGTGATGGACTACTTACGCCAAAATGCCTAA
Upstream 100 bases:
>100_bases TAATCGAACATGATTTTTATCAACTCTGTACAGAACTCAACGCGCAGGGCAGTATTAGCGTGGTGAGCTATCCACAGCAT GATGACCGAATGGAGAGTTA
Downstream 100 bases:
>100_bases GGTTTCCTGGCTATTTATTGGTCAATAAAATTAACGGAAAAGAGCGCTCTGGCGCTCTTGAGGTTATTGACAAAGCGCCG GTGGCGGAAATTAAAAATTA
Product: thioredoxin-dependent thiol peroxidase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MMSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKSAGVEVLGISTDKPEKLS RFAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYNGIHRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA
Sequences:
>Translated_157_residues MMSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKSAGVEVLGISTDKPEKLS RFAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYNGIHRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA >Mature_157_residues MMSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKSAGVEVLGISTDKPEKLS RFAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYNGIHRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=156, Percent_Identity=87.1794871794872, Blast_Score=296, Evalue=4e-82, Organism=Saccharomyces cerevisiae, GI6322180, Length=108, Percent_Identity=43.5185185185185, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17684; Mature: 17684
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDE CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCCHHH LKSAGVEVLGISTDKPEKLSRFAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYNGI HHHCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCHHCCCCCCCE HRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA EEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MMSPLKAGDIAPKFSLPDQDGEQISLADFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDE CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCCHHH LKSAGVEVLGISTDKPEKLSRFAEKELLNFTLLSDEHHEVAEQFGVWGEKSFMGKTYNGI HHHCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCCCCHHCCCCCCCE HRISFLIDADGKVEHVFDNFKTNNHHDIVMDYLRQNA EEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]