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The map label for this gene is yfgC [C]

Identifier: 22125310

GI number: 22125310

Start: 1568409

End: 1569986

Strand: Reverse

Name: yfgC [C]

Synonym: y1412

Alternate gene names: 22125310

Gene position: 1569986-1568409 (Counterclockwise)

Preceding gene: 22125315

Following gene: 22125309

Centisome position: 34.12

GC content: 50.06

Gene sequence:

>1578_bases
GTGATGATTGTACTGGAGAGCAGTGCAAGGAAGAAGAACTCTTACACATTACGGAGTCTAATTGTCATTACACTAGCAGG
GGCAGTCTCGTTTATGACAAGTCGGTTAAGTAAGACAGTGATCGCCACACTACTCAGTAGCTTGCTGCTCACCGGGCCAA
TATCTGCTGGAGCGGAAACCCAAGGCCTATTACCCGCTCAAGACCTATTACCCGATATAGGTACCTCGGCAGGCGCCACG
CTCAGTATTGATCAGGAAATGGCGATGGGGGACTTTTATGTCCGCCAAATGCGCGCCAGCGCACCATTGATTTATGACCC
CTTATTGACACAATACATCAATACATTGGGTAACCGGCTGGTTGCTAACGCTAACTCAGTACGCACCCCATTCCATTTCT
ATCTGGTGAATAACGATCAGATTAATGCTTTCGCCTTTTTTGGCGGTAACGTCGTGCTTCACTCAGCCCTATTCCGTTAT
ACCGATAACGAAAGCGAGTTGGCCTCCGTATTAGCTCATGAAATCTCTCACGTTACTCAGCGCCATTTAGCCAGGGCCAT
GGAAGAACAACAGCGGCTCGCACCACTCACTTGGGTGGGGGTGTTAGGATCAATTCTGCTAACAATGGCCAGCCCACAAG
CAGGCATGGCAGGATTAAGTGGGACATTGGCTGGCGCTCAGCAAGGTATTATCAGTTTTACTCAAGGCAATGAGCAAGAA
GCTGACCGAATTGGTATTCAGGTATTACAACGTTCCGGGTTTGATCCGCAAGCGATGCCTAATTTCCTGCAAAAACTGGC
CGATCAGTCACGATATGTCTCTAAACCCCCCGAAATGTTATTGACTCACCCCTTACCAGACAGCCGTTTATCTGATGCCC
GTAACCGCGCAAATCAGATGAAACCGCACCCTACTGCCTCATCGCAAGATTATCTCTTTGCCAAAATGCGTATTTTAGGT
ATGTATGGCGCGGATGAAAATAGCCTGACCCCTGAGCTGCTGGATAAGCTAAGTAAAGGCACAGTACGTGAGCAACTGGC
GGCAAAATACGGTCAGGCAGTCCAGCTTTATCAGGCCAAAAAATATGATGAAGCCCGTAACCTGCTACAACCCCTACTGG
CGCAGCAACCCGGCAATATTTGGTTCCTCGATCTCATGACGGATATCGATCTGGGGCAGAATAAATCAGCCGCTGCCATC
GCACGTTTACAAAATGCGATGGTAAAACAGAATGATGAACCGGTACTGCAACTGAATCTGGCTAACGCCTATGTTCAGGG
GAGGCAACCGGCAGCAGCCATCAAACTGCTACATCGTTATACTTTTGCCTATCCGAATGATCCGAATGGCTGGGATCTAT
TGGCACAAGCGACTGCCACGCAGGGTTTACGCGATCAAGAACTGGCGGCGCGGGCAGAGAGTCTGGCGTTGAGCGGCAAG
CTGACCCAGGCCATTGGCTTGCTCAGCGATGCCAGTGCGCGGGTGAAGTTGGGCAGCCTGGAACAAGCCCGTTATGATGC
CCGAATTGACCAGTTGCGGCGGTTAAACGAGCGTTTTCGTAAATATCAGAAGTCCTGA

Upstream 100 bases:

>100_bases
ATAACTGCAGGCTGGCTAAGATAGCGGTGAGTCTCAACAACGGATGATGAGCTTAACCTTTGACGTATTTGAACATATTT
TTGTGATCTAACTCGCTTTC

Downstream 100 bases:

>100_bases
TTATTTGGGGCTATTTGCTGGCAAGCCGTTTGTTTATTGGCAGATAGCATCTGGCCTGTTGATAAACAGTAGGCTAGCTA
AGAGAAAAACAGCAAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MMIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGAT
LSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRY
TDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQE
ADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILG
MYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAI
ARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGK
LTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS

Sequences:

>Translated_525_residues
MMIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGAT
LSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRY
TDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQE
ADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILG
MYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAI
ARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGK
LTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS
>Mature_525_residues
MMIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAETQGLLPAQDLLPDIGTSAGAT
LSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRLVANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRY
TDNESELASVLAHEISHVTQRHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQE
ADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQMKPHPTASSQDYLFAKMRILG
MYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAKKYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAI
ARLQNAMVKQNDEPVLQLNLANAYVQGRQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGK
LTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=493, Percent_Identity=69.5740365111562, Blast_Score=678, Evalue=0.0,
Organism=Escherichia coli, GI87082185, Length=228, Percent_Identity=27.1929824561404, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 57674; Mature: 57674

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAET
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QGLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRL
CCCCCHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHE
VANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEISHVTQ
ECCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHH
ADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHCC
KPHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAK
CCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAIARLQNAMVKQNDEPVLQLNL
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
ANAYVQGRQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGK
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
LTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMIVLESSARKKNSYTLRSLIVITLAGAVSFMTSRLSKTVIATLLSSLLLTGPISAGAET
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QGLLPAQDLLPDIGTSAGATLSIDQEMAMGDFYVRQMRASAPLIYDPLLTQYINTLGNRL
CCCCCHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHE
VANANSVRTPFHFYLVNNDQINAFAFFGGNVVLHSALFRYTDNESELASVLAHEISHVTQ
ECCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RHLARAMEEQQRLAPLTWVGVLGSILLTMASPQAGMAGLSGTLAGAQQGIISFTQGNEQE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHH
ADRIGIQVLQRSGFDPQAMPNFLQKLADQSRYVSKPPEMLLTHPLPDSRLSDARNRANQM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHCC
KPHPTASSQDYLFAKMRILGMYGADENSLTPELLDKLSKGTVREQLAAKYGQAVQLYQAK
CCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KYDEARNLLQPLLAQQPGNIWFLDLMTDIDLGQNKSAAAIARLQNAMVKQNDEPVLQLNL
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
ANAYVQGRQPAAAIKLLHRYTFAYPNDPNGWDLLAQATATQGLRDQELAARAESLALSGK
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
LTQAIGLLSDASARVKLGSLEQARYDARIDQLRRLNERFRKYQKS
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]