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The map label for this gene is nudC [H]

Identifier: 22124408

GI number: 22124408

Start: 556080

End: 556877

Strand: Direct

Name: nudC [H]

Synonym: y0493

Alternate gene names: 22124408

Gene position: 556080-556877 (Clockwise)

Preceding gene: 22124400

Following gene: 22124409

Centisome position: 12.09

GC content: 49.5

Gene sequence:

>798_bases
TTGTGCAACAACGATATGGAACTACAACTTACAGGTAAAGAAAGTGGCTGGTGGATTGTCAGTCATGAAAATAAATTATG
GTTGCCGAAAGGAGAGCTACCACAAGGCAATGCCGCTAACTGGTCATTGCAAGGCACGACTGCACGGCAGATTGGTGAAT
GGCAAGGGCAGTCTGTGTGGCTTATTCGCCAGATGATGCCTTCAGGGATGGGGTCGGTCCGGCAATTATTGGATGTTGAC
CGCGGTTTATTCCAATTGGCAGGGCGCGGTGTGCAATTAGCCGAATTCTATCGTTCACATCGCTTTTGTGGCTATTGTGG
GCATGAAATGCATGCCAGCCGGACGGAATGGGCCAGCTTATGTAACCACTGTCGGGAGCGCTATTATCCGCAAATTGCTC
CTTGTGTGATTGTTGCTATTCGCCGTGGTGATGAAATTTTGCTGGCACAACATGTGCGCCATCGTGGCGGTATCAATACC
GTGCTGGCGGGGTTTGTTGAAGTGGGTGAGACCCTGGAACAGGCGGTTTCACGGGAAGTGCTGGAAGAAAGTAATATTCA
CATTAAGAACTTGCGCTACGTGACGTCACAGCCTTGGCCATTTCCTCATTCACTGATGATGGCATTTATGGCGGATTATG
ACAGCGGTGAATTATGTCATGACCCGAAAGAGTTGCTGAATGCCGGCTGGTATCGCTATGACCAATTACCTTTGCTACCT
CCACCCGGTACCGTGGCACGCCGTCTGATTGAAGATACGGTGGTCTTATGTCGTGAACATAGCGATTTAAGCCAATAG

Upstream 100 bases:

>100_bases
TTTCCAGTCGGTTGAGCATGAACGACTCCATTAGTAAGAAAAAATATTGTGGGTTACAAAAATGTAACAGCCGGTTTCTA
GATTGCCAGTGAAATAGAGG

Downstream 100 bases:

>100_bases
CATTTTAAAATCAATATCTTGCTATTGCTTGTGAAAGAAAGGGGGGATGCAATGACGTACTTTCTTTATTTCTAATCCAT
AGGAGTAAAAAAGTGCGTCC

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MCNNDMELQLTGKESGWWIVSHENKLWLPKGELPQGNAANWSLQGTTARQIGEWQGQSVWLIRQMMPSGMGSVRQLLDVD
RGLFQLAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNHCRERYYPQIAPCVIVAIRRGDEILLAQHVRHRGGINT
VLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQPWPFPHSLMMAFMADYDSGELCHDPKELLNAGWYRYDQLPLLP
PPGTVARRLIEDTVVLCREHSDLSQ

Sequences:

>Translated_265_residues
MCNNDMELQLTGKESGWWIVSHENKLWLPKGELPQGNAANWSLQGTTARQIGEWQGQSVWLIRQMMPSGMGSVRQLLDVD
RGLFQLAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNHCRERYYPQIAPCVIVAIRRGDEILLAQHVRHRGGINT
VLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQPWPFPHSLMMAFMADYDSGELCHDPKELLNAGWYRYDQLPLLP
PPGTVARRLIEDTVVLCREHSDLSQ
>Mature_265_residues
MCNNDMELQLTGKESGWWIVSHENKLWLPKGELPQGNAANWSLQGTTARQIGEWQGQSVWLIRQMMPSGMGSVRQLLDVD
RGLFQLAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNHCRERYYPQIAPCVIVAIRRGDEILLAQHVRHRGGINT
VLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQPWPFPHSLMMAFMADYDSGELCHDPKELLNAGWYRYDQLPLLP
PPGTVARRLIEDTVVLCREHSDLSQ

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=203, Percent_Identity=30.5418719211823, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI50593112, Length=171, Percent_Identity=32.1637426900585, Blast_Score=98, Evalue=8e-21,
Organism=Escherichia coli, GI48994995, Length=253, Percent_Identity=75.098814229249, Blast_Score=409, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI212645999, Length=198, Percent_Identity=28.2828282828283, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71986510, Length=198, Percent_Identity=28.2828282828283, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321371, Length=175, Percent_Identity=30.2857142857143, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 30256; Mature: 30256

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNNDMELQLTGKESGWWIVSHENKLWLPKGELPQGNAANWSLQGTTARQIGEWQGQSVW
CCCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCEEECCCHHHHHHCCCCCHHH
LIRQMMPSGMGSVRQLLDVDRGLFQLAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHH
CNHCRERYYPQIAPCVIVAIRRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREV
HHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LEESNIHIKNLRYVTSQPWPFPHSLMMAFMADYDSGELCHDPKELLNAGWYRYDQLPLLP
HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCCCCC
PPGTVARRLIEDTVVLCREHSDLSQ
CCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MCNNDMELQLTGKESGWWIVSHENKLWLPKGELPQGNAANWSLQGTTARQIGEWQGQSVW
CCCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCEEECCCHHHHHHCCCCCHHH
LIRQMMPSGMGSVRQLLDVDRGLFQLAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCHHHHHHH
CNHCRERYYPQIAPCVIVAIRRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREV
HHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LEESNIHIKNLRYVTSQPWPFPHSLMMAFMADYDSGELCHDPKELLNAGWYRYDQLPLLP
HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCCCCCC
PPGTVARRLIEDTVVLCREHSDLSQ
CCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA