| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22124199
Identifier: 22124199
GI number: 22124199
Start: 301586
End: 302458
Strand: Reverse
Name: 22124199
Synonym: y0281
Alternate gene names: NA
Gene position: 302458-301586 (Counterclockwise)
Preceding gene: 22124204
Following gene: 22124198
Centisome position: 6.57
GC content: 49.14
Gene sequence:
>873_bases GTGCGGTTTCCCGCAGAGTGGCCTTTCCTGAAAGGTAATGTTGAACCGCCGCTAGGCGGGTTGAAAAAGGGTGTTTCATT GAACCGAACCTCCAGATCATGGATAAAAAGATCCAAGATCTGGGGTTCAGTGCACCGGGGTCATGGCCGGGAGTACACCT CGTTTGAGAGCTTCCACCATCAGATCGAACACTCGCAAGAAAAGACCGCACTTTATTACCGCCTACGTGTGAAAAATTCA TTATTCCGTAAGGGATTCGAACACTACATTTCCTTTGTTCGCAGTGATGAATCGAAGCTGGTGCTTGCTGAAGAGAATGT CTCGGTCAGCCTGACGTGCACCAACCGTGAGTTGCCGCTGTCGTTGCGCGTTGGTGATATCAATCAACTCAGCACAGACA GCCCTTCATTCGCGACGTTCCGCAATATTACCCGTCCTTCCGTGCCGTTGTATCCGGTGCTGGATGGGGGCCTGCATTGG TCATTGCTCTCCAATATGTCGTTGAACTACATGTCCTTACTGGATAAGGACGCGTTGAAGCAAATTCTGCATACCTATGA TTTCCCAAGCCTGCATAACCGGCAATCAGCCAGGGCATCGCAAAAGAAACTGGACGCTATCCAACGTATTGAAACACAAC CGATTGACCGGTTGTTTCGTGGCTTACCTGTCAGAGGGCTACAAACCACGCTATGGCTGGAGCAAGGCGCTTTTAGCTCT GAAGGCGAGCTTTATCTCTTCAGCACGGTATTAGCTCGCTTCTTCTCACTGTATGCCAGCGTCAATGCGTTTCATCTTTT AAAAGTCATCAATCTTGATAATCAGGAATGTTACGAATGGCCGGTACAGACAGGTCAACATGCACTGATGTAA
Upstream 100 bases:
>100_bases GTATAAGTTCTGGAAAGATGGTGCTCCAGTCCAGCCTCACCTTGACGGCGAAAAGCTCGGATCCAACGCGTAAGAGGGGA TTTGCCAACACTGAATTGAC
Downstream 100 bases:
>100_bases GTGTGGTTGAGGATGTAAGTGGGGTTGAGAATGTAAATGGGGTTGAGGCAAGACCCGAAGGGCAGGCATTGGATGTTTCA CGTTATAACTTTTTTCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Protein ImpG; LOW QUALITY PROTEIN Type VI Secretion Protein; Conserved Protein; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion System
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MRFPAEWPFLKGNVEPPLGGLKKGVSLNRTSRSWIKRSKIWGSVHRGHGREYTSFESFHHQIEHSQEKTALYYRLRVKNS LFRKGFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHW SLLSNMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSS EGELYLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM
Sequences:
>Translated_290_residues MRFPAEWPFLKGNVEPPLGGLKKGVSLNRTSRSWIKRSKIWGSVHRGHGREYTSFESFHHQIEHSQEKTALYYRLRVKNS LFRKGFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHW SLLSNMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSS EGELYLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM >Mature_290_residues MRFPAEWPFLKGNVEPPLGGLKKGVSLNRTSRSWIKRSKIWGSVHRGHGREYTSFESFHHQIEHSQEKTALYYRLRVKNS LFRKGFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHW SLLSNMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSS EGELYLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM
Specific function: Unknown
COG id: COG3519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33390; Mature: 33390
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPAEWPFLKGNVEPPLGGLKKGVSLNRTSRSWIKRSKIWGSVHRGHGREYTSFESFHH CCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QIEHSQEKTALYYRLRVKNSLFRKGFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPL HHHCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCE SLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLSNMSLNYMSLLDKDALK EEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHH QILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSS HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHEEEEECCCCCC EGELYLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCCC >Mature Secondary Structure MRFPAEWPFLKGNVEPPLGGLKKGVSLNRTSRSWIKRSKIWGSVHRGHGREYTSFESFHH CCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QIEHSQEKTALYYRLRVKNSLFRKGFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPL HHHCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCE SLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLSNMSLNYMSLLDKDALK EEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHH QILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSS HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHEEEEECCCCCC EGELYLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA