Click here to switch to the map view.

The map label for this gene is 22124198

Identifier: 22124198

GI number: 22124198

Start: 300534

End: 301631

Strand: Reverse

Name: 22124198

Synonym: y0280

Alternate gene names: NA

Gene position: 301631-300534 (Counterclockwise)

Preceding gene: 22124199

Following gene: 22124197

Centisome position: 6.56

GC content: 50.18

Gene sequence:

>1098_bases
ATGTTACGAATGGCCGGTACAGACAGGTCAACATGCACTGATGTAAGTGTGGTTGAGGATGTAAGTGGGGTTGAGAATGT
AAATGGGGTTGAGGCAAGACCCGAAGGGCAGGCATTGGATGTTTCACGTTATAACTTTTTTCAATTGGTCGAATTGCTCA
ACCAATTGGCGGTAGCGTGGCAAGGTGCGGCCCCTGTGGCGACCCCAGCCAATGAAGCCATCCGTTTTAAATCGACCGCC
AGTTTAGCATTCCCGACCAGAGATGTGATCGCACTGGACACCTCCGCCCGAGGTCAATTTGAGTTAGAGGTCTCTTTCCT
TGGATTGCATGGCAGCCAATCGCCGCTACCAGGATATTACCTCGATTCGTTAGCGTGGGAGGATGCGCAGAATGAGAACC
GGCTAACGGATTTCATGAACGTATTCAACCACCGCCTGTTAACGCTACTGCATCAGATTTGGCGTAAATACCGTTACTAC
ATCTGCTTTGACAATGGCGGTGATGATGCATTTTCACAACGCATGTTCTCGCTGGTGGGGTTAGGTAGCGAGGTCGTCCG
CAATAAATTGCAGATCAATCACAGCAAAATGCTGGCTTATGCAGGGCTGCTGGCCAGCCCCGGCAGAGCACCTGAAGTGA
TTTGCAGCCTTGTCTCACATTGCTTCAATTTGCCAGATATCACCTTACACAGTTGGCAGCTACGCAAAGTGGATATTGCC
CCCTCACAGCAGAATCGCTTGGGGACGAGGGTGAAAGTCCGTGGCAAGAAATATGATGAAAAATCAGTGCTTGGCGTTAA
TTTCTCCATCGGTTCACGGGTTGCGGATCGTAGCGGGAAATTCTTGTTGTGCATCAATAAGCTGACGCGAGAACAGTTCT
TATCCTTTTTACCCAACGGGGCTAATTACGCCTCGTTAGTGATGTTTGTCGCCTTCATTATGCGCGATCAATTCGCGTGG
GATTTACGCCTTGGGTTGGCCGAGCAACAGGTGGGCGGGATGGTGTTGGGAACCGAGCAAAATAGCCTATTGGGCTGGAC
CAGTATCCTCGGCGATCCCGAACAGAAACCCAGCGTAACGATTGGTGTAATGGAATAA

Upstream 100 bases:

>100_bases
AGCTTTATCTCTTCAGCACGGTATTAGCTCGCTTCTTCTCACTGTATGCCAGCGTCAATGCGTTTCATCTTTTAAAAGTC
ATCAATCTTGATAATCAGGA

Downstream 100 bases:

>100_bases
CGATCAGTGTAATGGGATAACGGCCGACGCGATGGAATAACGGTCGGCATGATGAAATAACGACCCGCGTTGTGAAATAG
CGATCAGCGTTATGAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpH; Quinoprotein Dehydrogenase; T6ss R; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpG; Type VI Secretion System Protein; Type VI Secretion Protein VasG; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MLRMAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTA
SLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYY
ICFDNGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIA
PSQQNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAW
DLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

Sequences:

>Translated_365_residues
MLRMAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTA
SLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYY
ICFDNGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIA
PSQQNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAW
DLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME
>Mature_365_residues
MLRMAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTA
SLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYY
ICFDNGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIA
PSQQNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAW
DLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40579; Mature: 40579

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAW
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHC
QGAAPVATPANEAIRFKSTASLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYY
CCCCCCCCCCCHHEEEECCCCEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCHH
LDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDDAFSQRMFSLVG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHC
LGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIA
CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEEECC
PSQQNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNG
CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCC
ANYASLVMFVAFIMRDQFAWDLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVT
CCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCCEEHHHHCCCCCCCCCEE
IGVME
EEEEC
>Mature Secondary Structure
MLRMAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAW
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHC
QGAAPVATPANEAIRFKSTASLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYY
CCCCCCCCCCCHHEEEECCCCEECCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCHH
LDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYYICFDNGGDDAFSQRMFSLVG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHC
LGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIA
CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECEEEEEEECC
PSQQNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNG
CCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCC
ANYASLVMFVAFIMRDQFAWDLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVT
CCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHCCEEEECCCCCCEEHHHHCCCCCCCCCEE
IGVME
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA