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The map label for this gene is scpA

Identifier: 21909803

GI number: 21909803

Start: 306480

End: 307184

Strand: Direct

Name: scpA

Synonym: SpyM3_0267

Alternate gene names: 21909803

Gene position: 306480-307184 (Clockwise)

Preceding gene: 21909802

Following gene: 21909804

Centisome position: 16.13

GC content: 35.18

Gene sequence:

>705_bases
ATGGATATAAAACTTAAAGATTTTGAAGGTCCTCTTGATTTACTCTTGCACTTGGTATCACAGTACAAAGTTGACATCTA
CGAGGTTCCTATTGTTGAGGTTATTGAGCAGTACCTTAATTATATTGAAACCTTACAGGTAATGAAACTTGAAGTGGCTG
GTGACTACATGCTGATGGCAAGTCAGCTCATGTTAATCAAAAGTAGAAGGCTATTACCAAAGGTGGTAGAACACATCGAA
GAAGAAGATTTAGAACAAGATCTGTTAGAAAAGATCGAAGAATATAGTCGCTTTAAAGCAGTTAGTCAAGCGTTAGCGAA
GCAGCATGACCAAAGGGCAAAATGGTATTCAAAACCTAAACAAGAATTAATTTTTGAAGATGCTATCTTACAAGAAGATA
AAACGGTGATGGATCTATTTCTAGCTTTTTCAAACATAATGGCAGCTAAAAGAGCAGTTTTAAAAAACAACCATACAGTC
ATCGAGCGTGATGATTATAAGATTGAAGACATGATGGCTTCTATTAAACAGCGACTGGAAAAAGAAAACGTTATTAGCTT
ATCAGCGATTTTTGAGGAATGCCAAACATTAAATGAAGTTATCAGTATATTTTTAGCTAGTCTAGAATTGATTAAGCTTC
ACGTGGTATTTGTAGAGCAGCTCTCTAATTTTGGGGCTATCATACTACGAAAGGAGAAGAAATGA

Upstream 100 bases:

>100_bases
TTATTTTGAAAGAAAAACTAGCTGGTAAATCGATAATAGAACTTAGCGATATTCTTGGGCTGAAAAGCCCTGTGACCTTA
GAAAAATACTACAAATCATA

Downstream 100 bases:

>100_bases
CGTATTTGTCACAGATAGAAGCGCTGCTATTTGTTGCAGGTGAAGAAGGATTAAGTTTGCGACATCTAGCGTCTATGTTA
TCATTAACGCCAACAGCTCT

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMASQLMLIKSRRLLPKVVEHIE
EEDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTV
IERDDYKIEDMMASIKQRLEKENVISLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK

Sequences:

>Translated_234_residues
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMASQLMLIKSRRLLPKVVEHIE
EEDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTV
IERDDYKIEDMMASIKQRLEKENVISLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK
>Mature_234_residues
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMASQLMLIKSRRLLPKVVEHIE
EEDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPKQELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTV
IERDDYKIEDMMASIKQRLEKENVISLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_STRP3 (Q8K8I5)

Other databases:

- EMBL:   AE014074
- EMBL:   BA000034
- RefSeq:   NP_664071.1
- RefSeq:   NP_802854.1
- EnsemblBacteria:   EBSTRT00000034280
- EnsemblBacteria:   EBSTRT00000035685
- GeneID:   1008581
- GeneID:   1066469
- GenomeReviews:   AE014074_GR
- GenomeReviews:   BA000034_GR
- KEGG:   spg:SpyM3_0267
- KEGG:   sps:SPs1592
- GeneTree:   EBGT00050000027681
- HOGENOM:   HBG728383
- OMA:   IRKQNID
- ProtClustDB:   PRK00104
- BioCyc:   SPYO193567:SPS1592-MONOMER
- BioCyc:   SPYO198466:SPYM3_0267-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 27379; Mature: 27379

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SQLMLIKSRRLLPKVVEHIEEEDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
KENVISLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MDIKLKDFEGPLDLLLHLVSQYKVDIYEVPIVEVIEQYLNYIETLQVMKLEVAGDYMLMA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SQLMLIKSRRLLPKVVEHIEEEDLEQDLLEKIEEYSRFKAVSQALAKQHDQRAKWYSKPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QELIFEDAILQEDKTVMDLFLAFSNIMAAKRAVLKNNHTVIERDDYKIEDMMASIKQRLE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
KENVISLSAIFEECQTLNEVISIFLASLELIKLHVVFVEQLSNFGAIILRKEKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345