| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
Click here to switch to the map view.
The map label for this gene is aroK
Identifier: 21672785
GI number: 21672785
Start: 574220
End: 574741
Strand: Reverse
Name: aroK
Synonym: BUsg520
Alternate gene names: 21672785
Gene position: 574741-574220 (Counterclockwise)
Preceding gene: 21672786
Following gene: 21672784
Centisome position: 89.6
GC content: 28.93
Gene sequence:
>522_bases ATGGCAGAAAAACGAAACATTTTTTTAATTGGACCTATGGGAGCTGGTAAAAGTACTATTGGTCGTCAGTTGTCTCAACA GCTAAATATGGAATTTTTTGATTCTGATCAAGAAATTGAAAAACGTACTGGAGCTAATATAAGTTGGGTTTTTGATGTTG AAGGTGAACATGGTTTTCGTCAAAGAGAAGTGAAAGTTATTGATGAACTTACAAAAAAACAAGGTATTGTTCTTGCTACA GGAGGAGGTTCAGTAAAATTTAAAGAAAATCGTAATATTTTATCTGCTCGCGGAATTGTTATATATTTAGAAACTACTAT TGAAAAACAGTTATCACGTACAAAAAGAGATAAAAAAAGACCATTATTGCAGTCTAATATTTCAAATCGTACTGTATTAG AAAATTTAGCATATGAAAGAAATCCATTATATGAAGAAATAGCAGATTTTAAAATTCAAACTGATAATCAAAGTGCTAAA TCTGTTGCATATAGTATTATTCATTTATTAGAAAAAATGTAA
Upstream 100 bases:
>100_bases TGTACGTAAAAATTTATTCTAATTGTAGCTTTTTTTATGTCTTGCTAGCAAAATTTGCTAAGCATTACTTTTATTAACGA ATTATCTTAGTAATAAAAAT
Downstream 100 bases:
>100_bases TGGAAATTTAAAAAAAATGTTTATAGAGTATAAAAATTATGGAACAATTAAAAGTTGTTTTAGGAAAACGTAGCTATCCT ATTAATATTGGATCTAGTAT
Product: shikimate kinase I
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAEKRNIFLIGPMGAGKSTIGRQLSQQLNMEFFDSDQEIEKRTGANISWVFDVEGEHGFRQREVKVIDELTKKQGIVLAT GGGSVKFKENRNILSARGIVIYLETTIEKQLSRTKRDKKRPLLQSNISNRTVLENLAYERNPLYEEIADFKIQTDNQSAK SVAYSIIHLLEKM
Sequences:
>Translated_173_residues MAEKRNIFLIGPMGAGKSTIGRQLSQQLNMEFFDSDQEIEKRTGANISWVFDVEGEHGFRQREVKVIDELTKKQGIVLAT GGGSVKFKENRNILSARGIVIYLETTIEKQLSRTKRDKKRPLLQSNISNRTVLENLAYERNPLYEEIADFKIQTDNQSAK SVAYSIIHLLEKM >Mature_172_residues AEKRNIFLIGPMGAGKSTIGRQLSQQLNMEFFDSDQEIEKRTGANISWVFDVEGEHGFRQREVKVIDELTKKQGIVLATG GGSVKFKENRNILSARGIVIYLETTIEKQLSRTKRDKKRPLLQSNISNRTVLENLAYERNPLYEEIADFKIQTDNQSAKS VAYSIIHLLEKM
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=171, Percent_Identity=78.3625730994152, Blast_Score=277, Evalue=2e-76, Organism=Escherichia coli, GI1786587, Length=160, Percent_Identity=32.5, Blast_Score=89, Evalue=1e-19,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_BUCAP (Q8K938)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660852.1 - ProteinModelPortal: Q8K938 - SMR: Q8K938 - EnsemblBacteria: EBBUCT00000000249 - GeneID: 1005546 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg520 - GeneTree: EBGT00050000007771 - HOGENOM: HBG335815 - OMA: VIYLRAN - ProtClustDB: PRK05057 - BioCyc: BAPH198804:BUSG520-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 19748; Mature: 19617
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 36-36 BINDING 60-60 BINDING 82-82 BINDING 120-120 BINDING 140-140 BINDING 157-157
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKRNIFLIGPMGAGKSTIGRQLSQQLNMEFFDSDQEIEKRTGANISWVFDVEGEHGFR CCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHCCCCEEEEEEECCCCCCH QREVKVIDELTKKQGIVLATGGGSVKFKENRNILSARGIVIYLETTIEKQLSRTKRDKKR HHHHHHHHHHHHHCCEEEEECCCEEEECCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHC PLLQSNISNRTVLENLAYERNPLYEEIADFKIQTDNQSAKSVAYSIIHLLEKM CHHHCCCCCHHHHHHHHHCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AEKRNIFLIGPMGAGKSTIGRQLSQQLNMEFFDSDQEIEKRTGANISWVFDVEGEHGFR CCCCCEEEEECCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHCCCCEEEEEEECCCCCCH QREVKVIDELTKKQGIVLATGGGSVKFKENRNILSARGIVIYLETTIEKQLSRTKRDKKR HHHHHHHHHHHHHCCEEEEECCCEEEECCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHC PLLQSNISNRTVLENLAYERNPLYEEIADFKIQTDNQSAKSVAYSIIHLLEKM CHHHCCCCCHHHHHHHHHCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438