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The map label for this gene is deoD

Identifier: 21672786

GI number: 21672786

Start: 575407

End: 576117

Strand: Reverse

Name: deoD

Synonym: BUsg521

Alternate gene names: 21672786

Gene position: 576117-575407 (Counterclockwise)

Preceding gene: 21672787

Following gene: 21672785

Centisome position: 89.81

GC content: 28.41

Gene sequence:

>711_bases
GTGCCAACTCTTCATATTAAAAGTGAAAAAAACGCTTTTTCAAATATAGTCCTTATGCCTGGTGATCCAGTAAGAGCTAA
ATATATTGCTGAAAATTATTTAGCAAATCCTGTTCAAATTAATGATACTAGATTAATGTTAGCATATACAGGATATTATA
AAAATAAAAAAATTTCTGTTATGAGTCACGGTATGGGAATACCTTCTGCATCTCTTTACGTAAGAGAGTTGATATTAGAA
TATAATGTAAAAAAAATTATTCGGGTAGGAACTTGTGGTACTATTCAGAATAATATAAAATTGCGTGATATTGTTATTAG
CATGGGTGCGTCTACAGATTCAAAAATTAATAGAATACGTTTCAATAATCACGATTACGCTGCAATTGCAGATTTTGAAA
TGATTTTTCATGCTTTTTCAACAGCTAAAAAAATGAATTTTAAGGTTCATATTGGAAATTTTTTTACGACAGATTCATTT
TATACTGAAAGTGAAGATATGTTAAAAATTTTAAAAAAATACAATATTATTGGAATAGATATGGAGACTGCTGGCATATA
TGCTGTTGCTGCTGAATTAAAAGCGCAAGCATTATCAATTTGTACTGTTTCTGATCACATTATTAAAAAAGATGCAGTAT
CATCAAAAGATAGGGAATCTAGTTTTCATAATATGATTACTCTTTCTTTGGAAACTACCTTATTGCTTTAA

Upstream 100 bases:

>100_bases
TATAGGACAAACCATTGCAAAATACTTTTCATTATCTGATATGAAATATGGAAAAAGTATGTTTTAAAAAAATTATTTAT
GAAAATAAGGAAAAAAATTA

Downstream 100 bases:

>100_bases
AAAAAATTTCAAAAAAAGAAAATTGATGTAAAAACTATATAATTTTTAAGATTAAATTTTTTTTATGGTGAGAAAGGGAT
TCGAACCCTTGATACGTTTC

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MPTLHIKSEKNAFSNIVLMPGDPVRAKYIAENYLANPVQINDTRLMLAYTGYYKNKKISVMSHGMGIPSASLYVRELILE
YNVKKIIRVGTCGTIQNNIKLRDIVISMGASTDSKINRIRFNNHDYAAIADFEMIFHAFSTAKKMNFKVHIGNFFTTDSF
YTESEDMLKILKKYNIIGIDMETAGIYAVAAELKAQALSICTVSDHIIKKDAVSSKDRESSFHNMITLSLETTLLL

Sequences:

>Translated_236_residues
MPTLHIKSEKNAFSNIVLMPGDPVRAKYIAENYLANPVQINDTRLMLAYTGYYKNKKISVMSHGMGIPSASLYVRELILE
YNVKKIIRVGTCGTIQNNIKLRDIVISMGASTDSKINRIRFNNHDYAAIADFEMIFHAFSTAKKMNFKVHIGNFFTTDSF
YTESEDMLKILKKYNIIGIDMETAGIYAVAAELKAQALSICTVSDHIIKKDAVSSKDRESSFHNMITLSLETTLLL
>Mature_235_residues
PTLHIKSEKNAFSNIVLMPGDPVRAKYIAENYLANPVQINDTRLMLAYTGYYKNKKISVMSHGMGIPSASLYVRELILEY
NVKKIIRVGTCGTIQNNIKLRDIVISMGASTDSKINRIRFNNHDYAAIADFEMIFHAFSTAKKMNFKVHIGNFFTTDSFY
TESEDMLKILKKYNIIGIDMETAGIYAVAAELKAQALSICTVSDHIIKKDAVSSKDRESSFHNMITLSLETTLLL

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family

Homologues:

Organism=Escherichia coli, GI1790844, Length=235, Percent_Identity=53.6170212765957, Blast_Score=290, Evalue=4e-80,
Organism=Escherichia coli, GI1790265, Length=164, Percent_Identity=29.2682926829268, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOD_BUCAP (Q8K937)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660853.1
- ProteinModelPortal:   Q8K937
- SMR:   Q8K937
- EnsemblBacteria:   EBBUCT00000000331
- GeneID:   1005447
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg521
- GeneTree:   EBGT00050000008137
- HOGENOM:   HBG617197
- OMA:   SFETHAF
- ProtClustDB:   PRK05819
- BioCyc:   BAPH198804:BUSG521-MONOMER
- HAMAP:   MF_01627
- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845
- PANTHER:   PTHR21234
- TIGRFAMs:   TIGR00107

Pfam domain/function: PF01048 PNP_UDP_1

EC number: =2.4.2.1

Molecular weight: Translated: 26578; Mature: 26447

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLHIKSEKNAFSNIVLMPGDPVRAKYIAENYLANPVQINDTRLMLAYTGYYKNKKISV
CCCEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCCCCEEEE
MSHGMGIPSASLYVRELILEYNVKKIIRVGTCGTIQNNIKLRDIVISMGASTDSKINRIR
EECCCCCCHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEE
FNNHDYAAIADFEMIFHAFSTAKKMNFKVHIGNFFTTDSFYTESEDMLKILKKYNIIGID
ECCCCEEEEHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCCHHHHHHHHHHCCEEEEE
METAGIYAVAAELKAQALSICTVSDHIIKKDAVSSKDRESSFHNMITLSLETTLLL
ECCCCCEEEHHHHHHHHEEEEECCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure 
PTLHIKSEKNAFSNIVLMPGDPVRAKYIAENYLANPVQINDTRLMLAYTGYYKNKKISV
CCEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCEEEEEEECCCCCCEEEE
MSHGMGIPSASLYVRELILEYNVKKIIRVGTCGTIQNNIKLRDIVISMGASTDSKINRIR
EECCCCCCHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEE
FNNHDYAAIADFEMIFHAFSTAKKMNFKVHIGNFFTTDSFYTESEDMLKILKKYNIIGID
ECCCCEEEEHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCCHHHHHHHHHHCCEEEEE
METAGIYAVAAELKAQALSICTVSDHIIKKDAVSSKDRESSFHNMITLSLETTLLL
ECCCCCEEEHHHHHHHHEEEEECCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438