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The map label for this gene is yhfC

Identifier: 21672781

GI number: 21672781

Start: 569559

End: 570722

Strand: Direct

Name: yhfC

Synonym: BUsg516

Alternate gene names: 21672781

Gene position: 569559-570722 (Clockwise)

Preceding gene: 21672743

Following gene: 21672791

Centisome position: 88.79

GC content: 23.63

Gene sequence:

>1164_bases
ATGCAAAATATCAACCAAATAAAACTCACATGGATTAGTTTTTTTTCATATGCTTTTACAGGTGCGTTAATCGTTATTAC
TGGAATGATAATGGGGGATATTGCTGATTATTTTAATTTATCTGTATCAGAAATGAGTAATATTTTTACTTTTTTAAATG
CAGGTATTTTAATATCAATTTTTTTAAATTCTTGGCTAATAGATCTTATATCAATAAAAAAACAGTTAATATTTGGTTTT
TTATTTTCTATAATCGCTATACTTGGTATAGTATTTTCGACCAGTATACTTTTATTTTCTATAAATATATTTATACTTGG
TTTAGTCAGTGGAATAACGATGTCAATTGGTACTTTTATTATCACATGTTTATATTCAGGTGAAAAAAGAGGATCACAAT
TGTTACTCACCGATTCATTTTTCAGCATGTCTGGGATGATATTTCCGATTATTTCTGCATATCTATTAGACAGAAAAATT
TTATGGTATTGGATTTATGTTTTTTTAGGAATTATTTATTTTCTTATTTTTATTTTAACAGTAAAATCGCACTTTCCAGT
ATCAGAAGAAAAAACAAAAAACAATAACGAAATTAAAAATTTAAATATAAATATTATTTTGTTATCTATCTCAGCTTTAT
TATATATTTTAGGACAATTGAGTTTTATTTCTTGGGTTCCACAATATACTACTGAAATAATAAATATTAATATTAAAAAA
ACTGGTGTTTTAGTAAGCAATTTTTGGATGGCATATATGATTGGAATGTGGTGTTTCAGTTTTATAATTAAATTTTTTAA
TTTACAACGCATGTTTATTTTCTTAACAGGAAGTTCTTCAGTACTTATGTACTGCTTTATTTATAGTAAAAGTTATTTAG
CACTAAAATATACTATTATTAGTTTAGGATTTTTTTCTAGTGCAATTTATACTATTATTATAACATTAGCATCACTAGAA
ACTAAAAAACCATCTGCAAAATTAATTAATTTAATTTTATTTTTCGGAACTATTGGAACCCTGTTGACGTTCATTATTAC
TAGTCCAATTGTTGCTAAAAAGGGATTATATACAACTTTAATTTTTTCGAATGTATTGTATGTTATAGTTTTTTTTCTAT
CTTGTATCATTTTTAAAAATAGTAAAAAAAAAGATCATTGTTAA

Upstream 100 bases:

>100_bases
CAATGACTTAAATAATTAAAAATAAAATATCTAAAAAGAATAAAAATATTCAAGATAAATATCTTAAAATTTTAATTTTT
ATAATAAAAAAGGTAAAAAA

Downstream 100 bases:

>100_bases
AAATATTATTAAAAAAGTTTTATTTTTTAAATAAACTGGAATAAATAATAATTTCTAGTTTATTTAAATAATTAATCTAT
CTCTACAGCAGAAAATACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MQNINQIKLTWISFFSYAFTGALIVITGMIMGDIADYFNLSVSEMSNIFTFLNAGILISIFLNSWLIDLISIKKQLIFGF
LFSIIAILGIVFSTSILLFSINIFILGLVSGITMSIGTFIITCLYSGEKRGSQLLLTDSFFSMSGMIFPIISAYLLDRKI
LWYWIYVFLGIIYFLIFILTVKSHFPVSEEKTKNNNEIKNLNINIILLSISALLYILGQLSFISWVPQYTTEIININIKK
TGVLVSNFWMAYMIGMWCFSFIIKFFNLQRMFIFLTGSSSVLMYCFIYSKSYLALKYTIISLGFFSSAIYTIIITLASLE
TKKPSAKLINLILFFGTIGTLLTFIITSPIVAKKGLYTTLIFSNVLYVIVFFLSCIIFKNSKKKDHC

Sequences:

>Translated_387_residues
MQNINQIKLTWISFFSYAFTGALIVITGMIMGDIADYFNLSVSEMSNIFTFLNAGILISIFLNSWLIDLISIKKQLIFGF
LFSIIAILGIVFSTSILLFSINIFILGLVSGITMSIGTFIITCLYSGEKRGSQLLLTDSFFSMSGMIFPIISAYLLDRKI
LWYWIYVFLGIIYFLIFILTVKSHFPVSEEKTKNNNEIKNLNINIILLSISALLYILGQLSFISWVPQYTTEIININIKK
TGVLVSNFWMAYMIGMWCFSFIIKFFNLQRMFIFLTGSSSVLMYCFIYSKSYLALKYTIISLGFFSSAIYTIIITLASLE
TKKPSAKLINLILFFGTIGTLLTFIITSPIVAKKGLYTTLIFSNVLYVIVFFLSCIIFKNSKKKDHC
>Mature_387_residues
MQNINQIKLTWISFFSYAFTGALIVITGMIMGDIADYFNLSVSEMSNIFTFLNAGILISIFLNSWLIDLISIKKQLIFGF
LFSIIAILGIVFSTSILLFSINIFILGLVSGITMSIGTFIITCLYSGEKRGSQLLLTDSFFSMSGMIFPIISAYLLDRKI
LWYWIYVFLGIIYFLIFILTVKSHFPVSEEKTKNNNEIKNLNINIILLSISALLYILGQLSFISWVPQYTTEIININIKK
TGVLVSNFWMAYMIGMWCFSFIIKFFNLQRMFIFLTGSSSVLMYCFIYSKSYLALKYTIISLGFFSSAIYTIIITLASLE
TKKPSAKLINLILFFGTIGTLLTFIITSPIVAKKGLYTTLIFSNVLYVIVFFLSCIIFKNSKKKDHC

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TsgA family

Homologues:

Organism=Escherichia coli, GI1789764, Length=389, Percent_Identity=55.2699228791774, Blast_Score=438, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TSGA_BUCAP (Q8K942)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660848.1
- ProteinModelPortal:   Q8K942
- EnsemblBacteria:   EBBUCT00000000412
- GeneID:   1005821
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg516
- GeneTree:   EBGT00050000007891
- HOGENOM:   HBG366226
- OMA:   TIDANKP
- ProtClustDB:   PRK03699
- BioCyc:   BAPH198804:BUSG516-MONOMER
- HAMAP:   MF_01044
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 44023; Mature: 44023

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcb669b4)-; HASH(0xc054e30)-; HASH(0xcc9ec00)-; HASH(0xc099c48)-; HASH(0xca806a4)-; HASH(0xcd13b5c)-; HASH(0xcd66934)-; HASH(0xcd4dec8)-; HASH(0xcd669c4)-; HASH(0xc8f42cc)-; HASH(0xccab4bc)-; HASH(0xc59e018)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNINQIKLTWISFFSYAFTGALIVITGMIMGDIADYFNLSVSEMSNIFTFLNAGILISI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FLNSWLIDLISIKKQLIFGFLFSIIAILGIVFSTSILLFSINIFILGLVSGITMSIGTFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITCLYSGEKRGSQLLLTDSFFSMSGMIFPIISAYLLDRKILWYWIYVFLGIIYFLIFILT
HHHHHCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSHFPVSEEKTKNNNEIKNLNINIILLSISALLYILGQLSFISWVPQYTTEIININIKK
HHCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
TGVLVSNFWMAYMIGMWCFSFIIKFFNLQRMFIFLTGSSSVLMYCFIYSKSYLALKYTII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHH
SLGFFSSAIYTIIITLASLETKKPSAKLINLILFFGTIGTLLTFIITSPIVAKKGLYTTL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHH
IFSNVLYVIVFFLSCIIFKNSKKKDHC
HHHHHHHHHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MQNINQIKLTWISFFSYAFTGALIVITGMIMGDIADYFNLSVSEMSNIFTFLNAGILISI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FLNSWLIDLISIKKQLIFGFLFSIIAILGIVFSTSILLFSINIFILGLVSGITMSIGTFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITCLYSGEKRGSQLLLTDSFFSMSGMIFPIISAYLLDRKILWYWIYVFLGIIYFLIFILT
HHHHHCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKSHFPVSEEKTKNNNEIKNLNINIILLSISALLYILGQLSFISWVPQYTTEIININIKK
HHCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
TGVLVSNFWMAYMIGMWCFSFIIKFFNLQRMFIFLTGSSSVLMYCFIYSKSYLALKYTII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHH
SLGFFSSAIYTIIITLASLETKKPSAKLINLILFFGTIGTLLTFIITSPIVAKKGLYTTL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHH
IFSNVLYVIVFFLSCIIFKNSKKKDHC
HHHHHHHHHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438