| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
Click here to switch to the map view.
The map label for this gene is thiL
Identifier: 21672709
GI number: 21672709
Start: 507207
End: 508178
Strand: Direct
Name: thiL
Synonym: BUsg444
Alternate gene names: 21672709
Gene position: 507207-508178 (Clockwise)
Preceding gene: 21672708
Following gene: 21672710
Centisome position: 79.07
GC content: 25.41
Gene sequence:
>972_bases ATGGAATATAACGAATTTGAAATTATATCTAAATTTTTTAAAAATCATCAAAAAAAAGATAAAAATCAAATTAAGGGAAT TGGAGACGATAGTGCCTTAATAAAAATACCAAAAAACAATCTTCTTGCAATTAGCACTGATACCTTGGTTGAGGGAAAGC ACTTTTTAAAAAATATAACTCCTAAAGATTTAGCATATAAATCTGTTGCAGTTAATCTTAGTGATTTAGCTGCTATGGGA GCAAAACCAACATGGATCACATTATCTATCACAATGCCAAAATCTGATAGTGTATGGCTAAAATCATTTAGTAAAAGTTT TTTTAAAATTTTAAATAAATATAAATTAAATTTAATTGGAGGAGATACGAATTCGGGTCCCTTAAGTATCACATTAAGCA TTTACGGATTAATAGAAGGAAAAAATGCACTACTACGAGGAAATGCTAAAAATGGAGATTTAATATATATCACTGGAAAT CTTGGAGAAAGCGCTGCAGGTTTATCCTTACTTCAAAAAAAAACTTTTTTAAAAAACGTGAAAATATGCAATTATTTAAT TAAAAAACATCTGAAACCTATTCCTAGAATTTCTGAAGGCATAGCATTAAGAAACATTGCTAATGCAGCTATCGATATAT CAGACGGTTTAATTTCTGATTTAGGTCATATATTAAAAAATAGTAAATGTGGAGCTGATATTAATTTAAATACAATACCT ATTTCTAAAATATTAACTGATAATTTTAAGATTGATGAATATTTAAACTGGGCTTTAAATTCTGGAGAAGATTATGAATT GTGTTTTACCATCTCAAAAAAAAATATTAAAAAATTAAATGTAGCTATTAAAAAAAAAATAATTAAATGCACATGTATAG GTTATATTACATCTGCAGAAAAGGGATTGAATTTGATACAAAATCAAAAAAAAATAATTTTTAAAAAATCAGGTTTTAAT CATTTTATTTAA
Upstream 100 bases:
>100_bases GTCTGGTACAAAAATGGGTAATAAGGGATCTGAAGCTGCATTAGCTGCATTAGAAATGATTAATATTATGAAAAAATTAA AAAAAATAAATAATTAAATT
Downstream 100 bases:
>100_bases TAAATATGAAAAATTGGTGAAATATGAAAGATAGATTTTATATGACAAGAGCAATAAAACTTAGTAAATTAGGAGAATTT ACAACTTCTCCAAATCCTAA
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MEYNEFEIISKFFKNHQKKDKNQIKGIGDDSALIKIPKNNLLAISTDTLVEGKHFLKNITPKDLAYKSVAVNLSDLAAMG AKPTWITLSITMPKSDSVWLKSFSKSFFKILNKYKLNLIGGDTNSGPLSITLSIYGLIEGKNALLRGNAKNGDLIYITGN LGESAAGLSLLQKKTFLKNVKICNYLIKKHLKPIPRISEGIALRNIANAAIDISDGLISDLGHILKNSKCGADINLNTIP ISKILTDNFKIDEYLNWALNSGEDYELCFTISKKNIKKLNVAIKKKIIKCTCIGYITSAEKGLNLIQNQKKIIFKKSGFN HFI
Sequences:
>Translated_323_residues MEYNEFEIISKFFKNHQKKDKNQIKGIGDDSALIKIPKNNLLAISTDTLVEGKHFLKNITPKDLAYKSVAVNLSDLAAMG AKPTWITLSITMPKSDSVWLKSFSKSFFKILNKYKLNLIGGDTNSGPLSITLSIYGLIEGKNALLRGNAKNGDLIYITGN LGESAAGLSLLQKKTFLKNVKICNYLIKKHLKPIPRISEGIALRNIANAAIDISDGLISDLGHILKNSKCGADINLNTIP ISKILTDNFKIDEYLNWALNSGEDYELCFTISKKNIKKLNVAIKKKIIKCTCIGYITSAEKGLNLIQNQKKIIFKKSGFN HFI >Mature_323_residues MEYNEFEIISKFFKNHQKKDKNQIKGIGDDSALIKIPKNNLLAISTDTLVEGKHFLKNITPKDLAYKSVAVNLSDLAAMG AKPTWITLSITMPKSDSVWLKSFSKSFFKILNKYKLNLIGGDTNSGPLSITLSIYGLIEGKNALLRGNAKNGDLIYITGN LGESAAGLSLLQKKTFLKNVKICNYLIKKHLKPIPRISEGIALRNIANAAIDISDGLISDLGHILKNSKCGADINLNTIP ISKILTDNFKIDEYLNWALNSGEDYELCFTISKKNIKKLNVAIKKKIIKCTCIGYITSAEKGLNLIQNQKKIIFKKSGFN HFI
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family
Homologues:
Organism=Escherichia coli, GI1786619, Length=322, Percent_Identity=51.2422360248447, Blast_Score=353, Evalue=1e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIL_BUCAP (Q8K9A5)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660776.1 - ProteinModelPortal: Q8K9A5 - SMR: Q8K9A5 - EnsemblBacteria: EBBUCT00000000530 - GeneID: 1005720 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg444 - GeneTree: EBGT00050000008007 - HOGENOM: HBG577902 - OMA: MGAEPAW - ProtClustDB: CLSK316267 - BioCyc: BAPH198804:BUSG444-MONOMER - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 - PIRSF: PIRSF005303 - TIGRFAMs: TIGR01379
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =2.7.4.16
Molecular weight: Translated: 35838; Mature: 35838
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNEFEIISKFFKNHQKKDKNQIKGIGDDSALIKIPKNNLLAISTDTLVEGKHFLKNIT CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCEEEEECCHHHCCHHHHHCCC PKDLAYKSVAVNLSDLAAMGAKPTWITLSITMPKSDSVWLKSFSKSFFKILNKYKLNLIG HHHHHHHHEEEEHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEE GDTNSGPLSITLSIYGLIEGKNALLRGNAKNGDLIYITGNLGESAAGLSLLQKKTFLKNV CCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KICNYLIKKHLKPIPRISEGIALRNIANAAIDISDGLISDLGHILKNSKCGADINLNTIP HHHHHHHHHHCCCCCCHHCCCHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCEEE ISKILTDNFKIDEYLNWALNSGEDYELCFTISKKNIKKLNVAIKKKIIKCTCIGYITSAE HHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEEEEEECCHH KGLNLIQNQKKIIFKKSGFNHFI HHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure MEYNEFEIISKFFKNHQKKDKNQIKGIGDDSALIKIPKNNLLAISTDTLVEGKHFLKNIT CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEECCCCEEEEECCHHHCCHHHHHCCC PKDLAYKSVAVNLSDLAAMGAKPTWITLSITMPKSDSVWLKSFSKSFFKILNKYKLNLIG HHHHHHHHEEEEHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEE GDTNSGPLSITLSIYGLIEGKNALLRGNAKNGDLIYITGNLGESAAGLSLLQKKTFLKNV CCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KICNYLIKKHLKPIPRISEGIALRNIANAAIDISDGLISDLGHILKNSKCGADINLNTIP HHHHHHHHHHCCCCCCHHCCCHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCEEE ISKILTDNFKIDEYLNWALNSGEDYELCFTISKKNIKKLNVAIKKKIIKCTCIGYITSAE HHHHHCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEEEEEECCHH KGLNLIQNQKKIIFKKSGFNHFI HHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438