| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is engB
Identifier: 21672684
GI number: 21672684
Start: 471941
End: 472546
Strand: Reverse
Name: engB
Synonym: BUsg417
Alternate gene names: 21672684
Gene position: 472546-471941 (Counterclockwise)
Preceding gene: 21672686
Following gene: 21672681
Centisome position: 73.67
GC content: 23.93
Gene sequence:
>606_bases TTGATTATTTTAAATTATAACAAAACATTTTTTTTAAAGAGTATTTCTAATATTTCTGATATACAAATTGAACATGGAAT TGAAATTGCTTTTATTGGTTATTCTAATTCAGGAAAATCGAGCGCTATTAACGCGTTGACTAATCAAAAAAAACTAGCTC GTTTCAGTAAAACGCCTGGTCGTACTCAATTAATTAACCTTTTTCAAGTGACTTCTGATTTTAGAATTGTTGATCTTCCG GGTTATGGTTATGCTAAAGCTCCTTTATTAATTAAGATAAAATGGCAAAATATGATATACAGTTACTTAAAAAATAGCAG ATCTTTAAAAGGATTAGTTTTGTTAATGGATATTAGATATCCTTTAAAAATTCTTGATCAAGATATCATTAGTATGGCTT TAAATTGTAAAATTCCTATTTTATTATTACTAACGAAATGTGATAAGTTTACAATAAATAATCAAAAAATTCAATTTCAA AAAGTGTATGAAAAATTAGATAAATTTTTGAATGAACTTCATATTCAACTATTTTCATCTTTAAAAAAAATAGGAATTGA AAAACTAAAATCTAAATTAAACTTTTGGTACGAAAAATATCGTTGA
Upstream 100 bases:
>100_bases ATATCAAACGTATTTGAGAAATATTTTTTAAAAAAAAGTATTAATTTTATGTAAAGAATATTTTAAGTTACCCTTGATTC TAAACATTTGAGGTTAAATT
Downstream 100 bases:
>100_bases ATATGAATATTTTTTATTCGTTAAATGAATACCATCGAATCAAATTAGATAATTTTTTAAAACATGTTTTTTTTAAAGTA ATTTCTTCAGAAGTAATATT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MIILNYNKTFFLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPGRTQLINLFQVTSDFRIVDLP GYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGLVLLMDIRYPLKILDQDIISMALNCKIPILLLLTKCDKFTINNQKIQFQ KVYEKLDKFLNELHIQLFSSLKKIGIEKLKSKLNFWYEKYR
Sequences:
>Translated_201_residues MIILNYNKTFFLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPGRTQLINLFQVTSDFRIVDLP GYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGLVLLMDIRYPLKILDQDIISMALNCKIPILLLLTKCDKFTINNQKIQFQ KVYEKLDKFLNELHIQLFSSLKKIGIEKLKSKLNFWYEKYR >Mature_201_residues MIILNYNKTFFLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPGRTQLINLFQVTSDFRIVDLP GYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGLVLLMDIRYPLKILDQDIISMALNCKIPILLLLTKCDKFTINNQKIQFQ KVYEKLDKFLNELHIQLFSSLKKIGIEKLKSKLNFWYEKYR
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=153, Percent_Identity=37.2549019607843, Blast_Score=85, Evalue=5e-17, Organism=Escherichia coli, GI145693205, Length=199, Percent_Identity=52.2613065326633, Blast_Score=217, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_BUCAP (Q8K9C9)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660751.1 - ProteinModelPortal: Q8K9C9 - SMR: Q8K9C9 - EnsemblBacteria: EBBUCT00000000183 - GeneID: 1005744 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg417 - GeneTree: EBGT00050000007773 - HOGENOM: HBG447097 - OMA: RWAKDGE - ProtClustDB: PRK00454 - BioCyc: BAPH198804:BUSG417-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23410; Mature: 23410
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILNYNKTFFLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPG CEEEECCCEEEEHHHCCCCCEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC RTQLINLFQVTSDFRIVDLPGYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGLVLLMDIRY HHHHHHHEEECCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECCC PLKILDQDIISMALNCKIPILLLLTKCDKFTINNQKIQFQKVYEKLDKFLNELHIQLFSS CHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH LKKIGIEKLKSKLNFWYEKYR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIILNYNKTFFLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPG CEEEECCCEEEEHHHCCCCCEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC RTQLINLFQVTSDFRIVDLPGYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGLVLLMDIRY HHHHHHHEEECCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECCC PLKILDQDIISMALNCKIPILLLLTKCDKFTINNQKIQFQKVYEKLDKFLNELHIQLFSS CHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH LKKIGIEKLKSKLNFWYEKYR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438