| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
Click here to switch to the map view.
The map label for this gene is gmk
Identifier: 21672686
GI number: 21672686
Start: 474709
End: 475332
Strand: Reverse
Name: gmk
Synonym: BUsg419
Alternate gene names: 21672686
Gene position: 475332-474709 (Counterclockwise)
Preceding gene: 21672687
Following gene: 21672684
Centisome position: 74.1
GC content: 25.48
Gene sequence:
>624_bases ATGTCTCAAGGTATTCTTTTTATTATTTCAGCACCAAGTGGAACAGGAAAATCTAGCTTAATTGAAGGATTATTAAAAAC AAAATTTTTATATAATATTCAAGTTTCTATTTCTCATACTACTAGAGTTATGAGACCTGGTGAATCTCATGGAAAACACT ATTATTTTATATCAAAAAAAGAATTCAGAATAATGATTAAACAAGAATCTTTTTTAGAATATGCTAAAGTGTTTAATAAC TATTATGGAACTTCACGTCAATCTATTGAAAAAATGTTGCTTTCAGGGATTGATGTTTTTCTTGATATAGATTGGCAAGG AGCTAATCAGATTCGGTATAAAATGCCAAATTCGAAGAGTATTTTTTTGCTTCCTCCATCTAAAGATGAATTATATAAAA GATTAAGAGAACGAGGACAAGATAGTGATACAGTTATTTCAAAAAGAATGGAAAAAGCTGTTGATGAAATGAATCATTAT TCAGAATATGACTATTTAATTATTAATGATGATTTTCAAAAAGCTATAAATGATTTAAGAACTATTATTATTGCTGAGCA TTTATGTTTATTTCATCAAAAAAATAAGCATAATGTATTAATTTCTCAATTATTAAAAAGTTAA
Upstream 100 bases:
>100_bases ATATCTTTTTAATTAAAAATTAGTATTTTTTATTTAATGATTTTTTTTTAAAAAAAATTCTTTTTTTTGCAAAAATTTAG ATAATATTGTTTAAAAAATC
Downstream 100 bases:
>100_bases AACTATAAAATTTTTTCTGTATGAAATATTTTTTTTATTTAAAATTATTTATATAATTCTATTGAGAAAATAGAATTATA TAATTAATAAAAGTTGATTT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSQGILFIISAPSGTGKSSLIEGLLKTKFLYNIQVSISHTTRVMRPGESHGKHYYFISKKEFRIMIKQESFLEYAKVFNN YYGTSRQSIEKMLLSGIDVFLDIDWQGANQIRYKMPNSKSIFLLPPSKDELYKRLRERGQDSDTVISKRMEKAVDEMNHY SEYDYLIINDDFQKAINDLRTIIIAEHLCLFHQKNKHNVLISQLLKS
Sequences:
>Translated_207_residues MSQGILFIISAPSGTGKSSLIEGLLKTKFLYNIQVSISHTTRVMRPGESHGKHYYFISKKEFRIMIKQESFLEYAKVFNN YYGTSRQSIEKMLLSGIDVFLDIDWQGANQIRYKMPNSKSIFLLPPSKDELYKRLRERGQDSDTVISKRMEKAVDEMNHY SEYDYLIINDDFQKAINDLRTIIIAEHLCLFHQKNKHNVLISQLLKS >Mature_206_residues SQGILFIISAPSGTGKSSLIEGLLKTKFLYNIQVSISHTTRVMRPGESHGKHYYFISKKEFRIMIKQESFLEYAKVFNNY YGTSRQSIEKMLLSGIDVFLDIDWQGANQIRYKMPNSKSIFLLPPSKDELYKRLRERGQDSDTVISKRMEKAVDEMNHYS EYDYLIINDDFQKAINDLRTIIIAEHLCLFHQKNKHNVLISQLLKS
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=190, Percent_Identity=33.6842105263158, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI4504221, Length=190, Percent_Identity=33.6842105263158, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI226874831, Length=190, Percent_Identity=33.6842105263158, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI111154074, Length=165, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI38570142, Length=185, Percent_Identity=28.6486486486486, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI21361598, Length=192, Percent_Identity=28.6458333333333, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI14780902, Length=188, Percent_Identity=23.4042553191489, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1790080, Length=205, Percent_Identity=64.8780487804878, Blast_Score=295, Evalue=2e-81, Organism=Caenorhabditis elegans, GI17508835, Length=172, Percent_Identity=36.6279069767442, Blast_Score=120, Evalue=4e-28, Organism=Caenorhabditis elegans, GI193203132, Length=172, Percent_Identity=36.6279069767442, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6320662, Length=191, Percent_Identity=40.8376963350785, Blast_Score=136, Evalue=3e-33, Organism=Drosophila melanogaster, GI21356141, Length=173, Percent_Identity=38.150289017341, Blast_Score=120, Evalue=5e-28, Organism=Drosophila melanogaster, GI45554481, Length=174, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI85724806, Length=174, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI116007136, Length=174, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24640542, Length=174, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI45554489, Length=174, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI161077626, Length=174, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_BUCAP (Q8K9C7)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660753.1 - ProteinModelPortal: Q8K9C7 - SMR: Q8K9C7 - EnsemblBacteria: EBBUCT00000000473 - GeneID: 1005742 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg419 - GeneTree: EBGT00050000008057 - HOGENOM: HBG671982 - OMA: DIDWQGT - ProtClustDB: PRK00300 - BioCyc: BAPH198804:BUSG419-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 24153; Mature: 24022
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGILFIISAPSGTGKSSLIEGLLKTKFLYNIQVSISHTTRVMRPGESHGKHYYFISKK CCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEEECCEEEECCCCCCCCEEEEEECC EFRIMIKQESFLEYAKVFNNYYGTSRQSIEKMLLSGIDVFLDIDWQGANQIRYKMPNSKS EEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCE IFLLPPSKDELYKRLRERGQDSDTVISKRMEKAVDEMNHYSEYDYLIINDDFQKAINDLR EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHH TIIIAEHLCLFHQKNKHNVLISQLLKS HHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure SQGILFIISAPSGTGKSSLIEGLLKTKFLYNIQVSISHTTRVMRPGESHGKHYYFISKK CCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEEECCEEEECCCCCCCCEEEEEECC EFRIMIKQESFLEYAKVFNNYYGTSRQSIEKMLLSGIDVFLDIDWQGANQIRYKMPNSKS EEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCE IFLLPPSKDELYKRLRERGQDSDTVISKRMEKAVDEMNHYSEYDYLIINDDFQKAINDLR EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHH TIIIAEHLCLFHQKNKHNVLISQLLKS HHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438