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The map label for this gene is ygfA [C]

Identifier: 21672669

GI number: 21672669

Start: 448120

End: 448719

Strand: Reverse

Name: ygfA [C]

Synonym: BUsg396

Alternate gene names: 21672669

Gene position: 448719-448120 (Counterclockwise)

Preceding gene: 21672670

Following gene: 21672667

Centisome position: 69.95

GC content: 25.33

Gene sequence:

>600_bases
ATGTCGACTAAACGTTCACAAAATCGAAAAGAAATTCGCTCCTATATTAGAATAGTACGCAATTCAGTAACGTTAACAAA
AAAATATGATGAATCAAATAAAATTGTGAGAACTGCATTTAATTGTAATATTATTTATAATGCTAAAAACATTGCTTGTT
TTTTATCATTTGATGGAGAAATAAATACATATCCCTTAATTTTAAAATTATGGTTAAACAATAAAAATGTATTTCTTCCT
ATAGTAAGTTCTAGTTATTCAAGAAAATTATTTTTTGTGCCGTTTACTTGTAAATCTATTTTATATTATAATCAATATAA
CATATTACAACCTTTTTATAATATGAAAGATATTATTTTAGAATCAGATTTAGATTTAATAATAGTACCTTTAGTAGCAT
TTGATTGTAGAGGTGTGCGCCTAGGTATGGGTGGAGGTTTTTATGATCAGTTTTTAAAAAATTGGGAAAGAAAAAAATTT
ATTCCAATAGGAATGGCTTATGATTTTCAGTTCGTAAATTACATACCTAGACAGCCTTGGGATATTTCCCTACCTATTGT
TTTAACACCTAATAAAATACACTTTTTTCATCAAAATTAA

Upstream 100 bases:

>100_bases
TCAAAAAGGAGTTGAGATTATCAAAAATTAATTCTACTAACGTTTAAAACCGTTTAAAACCGTTTGAAACCTATCAATAA
TATAATTTATATAGATTATT

Downstream 100 bases:

>100_bases
CTTAAATCACCAAATTTTATTTGTAAAGCAGTAATTGCTGCAATTACAGCTGTTTCTGTTCTTAAAATTCTAGGTCCTAA
TTTAATAGGAATAAATCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSTKRSQNRKEIRSYIRIVRNSVTLTKKYDESNKIVRTAFNCNIIYNAKNIACFLSFDGEINTYPLILKLWLNNKNVFLP
IVSSSYSRKLFFVPFTCKSILYYNQYNILQPFYNMKDIILESDLDLIIVPLVAFDCRGVRLGMGGGFYDQFLKNWERKKF
IPIGMAYDFQFVNYIPRQPWDISLPIVLTPNKIHFFHQN

Sequences:

>Translated_199_residues
MSTKRSQNRKEIRSYIRIVRNSVTLTKKYDESNKIVRTAFNCNIIYNAKNIACFLSFDGEINTYPLILKLWLNNKNVFLP
IVSSSYSRKLFFVPFTCKSILYYNQYNILQPFYNMKDIILESDLDLIIVPLVAFDCRGVRLGMGGGFYDQFLKNWERKKF
IPIGMAYDFQFVNYIPRQPWDISLPIVLTPNKIHFFHQN
>Mature_198_residues
STKRSQNRKEIRSYIRIVRNSVTLTKKYDESNKIVRTAFNCNIIYNAKNIACFLSFDGEINTYPLILKLWLNNKNVFLPI
VSSSYSRKLFFVPFTCKSILYYNQYNILQPFYNMKDIILESDLDLIIVPLVAFDCRGVRLGMGGGFYDQFLKNWERKKFI
PIGMAYDFQFVNYIPRQPWDISLPIVLTPNKIHFFHQN

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family

Homologues:

Organism=Escherichia coli, GI1789278, Length=178, Percent_Identity=40.4494382022472, Blast_Score=150, Evalue=6e-38,
Organism=Saccharomyces cerevisiae, GI6321031, Length=208, Percent_Identity=29.3269230769231, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y396_BUCAP (Q8K9E3)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660736.1
- ProteinModelPortal:   Q8K9E3
- SMR:   Q8K9E3
- EnsemblBacteria:   EBBUCT00000000147
- GeneID:   1005811
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg396
- GeneTree:   EBGT00050000008217
- HOGENOM:   HBG325345
- OMA:   YAHDCQQ
- BioCyc:   BAPH198804:BUSG396-MONOMER
- InterPro:   IPR002698
- Gene3D:   G3DSA:3.40.50.10420
- PANTHER:   PTHR23407:SF1
- PIRSF:   PIRSF006806
- TIGRFAMs:   TIGR02727

Pfam domain/function: PF01812 5-FTHF_cyc-lig

EC number: NA

Molecular weight: Translated: 23557; Mature: 23426

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: BINDING 181-181

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKRSQNRKEIRSYIRIVRNSVTLTKKYDESNKIVRTAFNCNIIYNAKNIACFLSFDGE
CCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEEEEEEECCCEEEEEEECCC
INTYPLILKLWLNNKNVFLPIVSSSYSRKLFFVPFTCKSILYYNQYNILQPFYNMKDIIL
CCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEEHHEEEEECCCCCCCCCCCHHHEEE
ESDLDLIIVPLVAFDCRGVRLGMGGGFYDQFLKNWERKKFIPIGMAYDFQFVNYIPRQPW
ECCCCEEEEEEEHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEEECEEEECCCCCCCC
DISLPIVLTPNKIHFFHQN
CEEEEEEECCCEEEEEECC
>Mature Secondary Structure 
STKRSQNRKEIRSYIRIVRNSVTLTKKYDESNKIVRTAFNCNIIYNAKNIACFLSFDGE
CCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEEEEEEECCCEEEEEEECCC
INTYPLILKLWLNNKNVFLPIVSSSYSRKLFFVPFTCKSILYYNQYNILQPFYNMKDIIL
CCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEEEHHEEEEECCCCCCCCCCCHHHEEE
ESDLDLIIVPLVAFDCRGVRLGMGGGFYDQFLKNWERKKFIPIGMAYDFQFVNYIPRQPW
ECCCCEEEEEEEHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEEECEEEECCCCCCCC
DISLPIVLTPNKIHFFHQN
CEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438