Click here to switch to the map view.

The map label for this gene is dksA

Identifier: 21672479

GI number: 21672479

Start: 215561

End: 216016

Strand: Reverse

Name: dksA

Synonym: BUsg192

Alternate gene names: 21672479

Gene position: 216016-215561 (Counterclockwise)

Preceding gene: 21672483

Following gene: 21672478

Centisome position: 33.68

GC content: 27.85

Gene sequence:

>456_bases
ATGGAAAAAGAACAAAATAAAAAAACATCATCTCTAAACGTTCTTGCTATTGCTGGTTTACAGCCTTATCAAAAAAAAAC
AGATGAAGAATATATGAATGAAAAACAAATGTTACATTTTAAAAAAATTCTTGAAACATGGAAGAATCAATTAACAATTG
AAATTAATCATACTTTGCTTTATATACAGGATAAATCAACTAATTTTCCAGATCCTATTGATCGAGCAGCTCAAGAAGAA
GAATTTAGTTTAGAATTACGAAATCGAGATAGAAGTCGTAAATTAATAAAAAAAATACAAGAAACTTTAAAAAAAATAAA
AGATAAAGATTTTGGTTATTGCAATTCTTGTGCTGTTGAAATTGGCATACGTCGTTTAGAAGCCAGACCTACTGCAAATT
TGTGTATTGACTGTAAAACACTAGCAGAAATTCGAGAAAAACAAATGGCTGGTTAA

Upstream 100 bases:

>100_bases
GTAAACATTTTTTGAATAACATGTATTGTTAATAATTAATATTATGCTAATAATAGATTTTTTATTTTAAATACATGTAA
ATTTTTTATTGGAAAAAAAT

Downstream 100 bases:

>100_bases
TATATATAGATGAGGATATTCGATTGATATATTAAATTATATCGAGTATCCTTTCTTTAGTTTTGTCAATTATGTTCTTT
AAACAAAGTAGGTAAATTAT

Product: DnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MEKEQNKKTSSLNVLAIAGLQPYQKKTDEEYMNEKQMLHFKKILETWKNQLTIEINHTLLYIQDKSTNFPDPIDRAAQEE
EFSLELRNRDRSRKLIKKIQETLKKIKDKDFGYCNSCAVEIGIRRLEARPTANLCIDCKTLAEIREKQMAG

Sequences:

>Translated_151_residues
MEKEQNKKTSSLNVLAIAGLQPYQKKTDEEYMNEKQMLHFKKILETWKNQLTIEINHTLLYIQDKSTNFPDPIDRAAQEE
EFSLELRNRDRSRKLIKKIQETLKKIKDKDFGYCNSCAVEIGIRRLEARPTANLCIDCKTLAEIREKQMAG
>Mature_151_residues
MEKEQNKKTSSLNVLAIAGLQPYQKKTDEEYMNEKQMLHFKKILETWKNQLTIEINHTLLYIQDKSTNFPDPIDRAAQEE
EFSLELRNRDRSRKLIKKIQETLKKIKDKDFGYCNSCAVEIGIRRLEARPTANLCIDCKTLAEIREKQMAG

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger

Homologues:

Organism=Escherichia coli, GI1786338, Length=151, Percent_Identity=73.5099337748344, Blast_Score=248, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DKSA_BUCAP (Q8K9U5)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660546.1
- ProteinModelPortal:   Q8K9U5
- SMR:   Q8K9U5
- EnsemblBacteria:   EBBUCT00000000448
- GeneID:   1005389
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg192
- GeneTree:   EBGT00050000007995
- HOGENOM:   HBG728818
- OMA:   VDCKTLA
- ProtClustDB:   CLSK315781
- BioCyc:   BAPH198804:BUSG192-MONOMER
- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458
- TIGRFAMs:   TIGR02420

Pfam domain/function: PF01258 zf-dskA_traR

EC number: NA

Molecular weight: Translated: 17721; Mature: 17721

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS01102 ZF_DKSA_1; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEQNKKTSSLNVLAIAGLQPYQKKTDEEYMNEKQMLHFKKILETWKNQLTIEINHTLL
CCCCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEE
YIQDKSTNFPDPIDRAAQEEEFSLELRNRDRSRKLIKKIQETLKKIKDKDFGYCNSCAVE
EEECCCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IGIRRLEARPTANLCIDCKTLAEIREKQMAG
HHHHHHCCCCCCCEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKEQNKKTSSLNVLAIAGLQPYQKKTDEEYMNEKQMLHFKKILETWKNQLTIEINHTLL
CCCCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEE
YIQDKSTNFPDPIDRAAQEEEFSLELRNRDRSRKLIKKIQETLKKIKDKDFGYCNSCAVE
EEECCCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IGIRRLEARPTANLCIDCKTLAEIREKQMAG
HHHHHHCCCCCCCEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438