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The map label for this gene is yabI [C]

Identifier: 21672422

GI number: 21672422

Start: 145841

End: 146599

Strand: Reverse

Name: yabI [C]

Synonym: BUsg132

Alternate gene names: 21672422

Gene position: 146599-145841 (Counterclockwise)

Preceding gene: 21672426

Following gene: 21672418

Centisome position: 22.85

GC content: 26.88

Gene sequence:

>759_bases
ATGGAATCTTGGTTAACATCTTTAATAACACAGTCTTTAACATTTTCAATATTAATAGTTGGAATTGTATCTTTTTTAGA
ATCACTCGCTTTAGTAGGATTGCTATTACCTGGAATAGTGTTTATGGCAACATTAGGTACATTTATAGGTAATGGAAAAC
TGCCTTTTTATCCCTCTTGGATAGCAGGTATAATCGGATGTTTACTAGGAGATTGGTGTTCATACTTTATCGGTTTATAC
TTTAAAAATTGGCTATATAGTTTAAAATTCTTAAAAAAAAATTGTCATTTGCTTGATAAAACTAAATCTCTATTGCATAA
ACACAGTATGATAACAATACTCGTAGGTCGTTTTATAGGACCAACTAGACCTCTTATACCAATGGTTTCTGGAATGCTAA
AATTGCCTTTAAAAAAATTTATTCTTCCTAGTTTATTAGGATGCATTTTATGGCCTCCAATATATTTCTTTCCAGGAATT
ATTACAGGAATAACTATTAATATACCTCCAAATCCAAAAAATGACTATTTTAAATGGCTTTTATTGATTATTGCAATTTT
AATATGGTTTGGAATATGGTTAACATCAAAATGGTGGAAAATAAAAAAAATAAAAAATAAAAATAATATACATTTTATTA
AAAGAAACATAGGATGGATAGCATTAATTATACTATCATCTGGAATCATAGGGTTAATATTAATTCAATTTCATCCTACA
ATGATAATTGTCAGAAAAGTTTTTTCAACTATATTATAA

Upstream 100 bases:

>100_bases
CAATATTTATCAAAAAAAACTAAATCAATTAAAAAATAATTACATTTAAAATTATTTTATATATTTTACAATAAAAAACT
TGAAAAATTAATGAGTATTT

Downstream 100 bases:

>100_bases
AGATATTGGTATCAAGATAATTGATATCAATATACTACTAAAGATACTAGATCTTCGCATAAATAAAATCAATATGTAAT
ATCTTCATTTTGAATGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MESWLTSLITQSLTFSILIVGIVSFLESLALVGLLLPGIVFMATLGTFIGNGKLPFYPSWIAGIIGCLLGDWCSYFIGLY
FKNWLYSLKFLKKNCHLLDKTKSLLHKHSMITILVGRFIGPTRPLIPMVSGMLKLPLKKFILPSLLGCILWPPIYFFPGI
ITGITINIPPNPKNDYFKWLLLIIAILIWFGIWLTSKWWKIKKIKNKNNIHFIKRNIGWIALIILSSGIIGLILIQFHPT
MIIVRKVFSTIL

Sequences:

>Translated_252_residues
MESWLTSLITQSLTFSILIVGIVSFLESLALVGLLLPGIVFMATLGTFIGNGKLPFYPSWIAGIIGCLLGDWCSYFIGLY
FKNWLYSLKFLKKNCHLLDKTKSLLHKHSMITILVGRFIGPTRPLIPMVSGMLKLPLKKFILPSLLGCILWPPIYFFPGI
ITGITINIPPNPKNDYFKWLLLIIAILIWFGIWLTSKWWKIKKIKNKNNIHFIKRNIGWIALIILSSGIIGLILIQFHPT
MIIVRKVFSTIL
>Mature_252_residues
MESWLTSLITQSLTFSILIVGIVSFLESLALVGLLLPGIVFMATLGTFIGNGKLPFYPSWIAGIIGCLLGDWCSYFIGLY
FKNWLYSLKFLKKNCHLLDKTKSLLHKHSMITILVGRFIGPTRPLIPMVSGMLKLPLKKFILPSLLGCILWPPIYFFPGI
ITGITINIPPNPKNDYFKWLLLIIAILIWFGIWLTSKWWKIKKIKNKNNIHFIKRNIGWIALIILSSGIIGLILIQFHPT
MIIVRKVFSTIL

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family

Homologues:

Organism=Escherichia coli, GI1786252, Length=251, Percent_Identity=50.597609561753, Blast_Score=255, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y132_BUCAP (Q8KA02)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660489.1
- EnsemblBacteria:   EBBUCT00000000087
- GeneID:   1005949
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg132
- GeneTree:   EBGT00050000007880
- HOGENOM:   HBG657460
- OMA:   TVMMAGL
- ProtClustDB:   CLSK873788
- BioCyc:   BAPH198804:BUSG132-MONOMER
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 28684; Mature: 28684

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x4047274c)-; HASH(0x404677c0)-; HASH(0x40477558)-; HASH(0xb31a2cc)-; HASH(0xaef4338)-; HASH(0xbff9850)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESWLTSLITQSLTFSILIVGIVSFLESLALVGLLLPGIVFMATLGTFIGNGKLPFYPSW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IAGIIGCLLGDWCSYFIGLYFKNWLYSLKFLKKNCHLLDKTKSLLHKHSMITILVGRFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTRPLIPMVSGMLKLPLKKFILPSLLGCILWPPIYFFPGIITGITINIPPNPKNDYFKWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHH
LLIIAILIWFGIWLTSKWWKIKKIKNKNNIHFIKRNIGWIALIILSSGIIGLILIQFHPT
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHH
MIIVRKVFSTIL
HHHHHHHHHHHH
>Mature Secondary Structure
MESWLTSLITQSLTFSILIVGIVSFLESLALVGLLLPGIVFMATLGTFIGNGKLPFYPSW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IAGIIGCLLGDWCSYFIGLYFKNWLYSLKFLKKNCHLLDKTKSLLHKHSMITILVGRFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PTRPLIPMVSGMLKLPLKKFILPSLLGCILWPPIYFFPGIITGITINIPPNPKNDYFKWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHH
LLIIAILIWFGIWLTSKWWKIKKIKNKNNIHFIKRNIGWIALIILSSGIIGLILIQFHPT
HHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHH
MIIVRKVFSTIL
HHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438