| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is folA
Identifier: 21672426
GI number: 21672426
Start: 149938
End: 150423
Strand: Reverse
Name: folA
Synonym: BUsg136
Alternate gene names: 21672426
Gene position: 150423-149938 (Counterclockwise)
Preceding gene: 21672427
Following gene: 21672422
Centisome position: 23.45
GC content: 24.9
Gene sequence:
>486_bases ATGAAAATTAGTTTAATTTCAGCAATTTCAAATAATTTAGTAATTGGACATAATAATAAAATACCTTGGTATCTTCCAGA AGATCTAAAATGGTTCAAAAAAAATACAATACATAAAGATATTATTATGGGACGTCTCACATGGGAATCTATTTTAAATC ATCCCTTACCAATGCGAAAAAATATTGTAATCAGTCATAAAGAAATCATACATAAGGATGTGATATGGGCCAATTCAATC TCGAAAGCATTGCTTTCTACTACATATGACAAAGAAATTATGGTAATCGGAGGATCAAAAATATATAAACAAATGTTGTT TTATGCAACTAAGCTATATTTAACACATGTAGATTTTAATGGAATTGGTGATACTTATTTTCCTCAATATAAATCATGTA AATTTTGGAAAACTATATTTAGAAAACAACATTTTAAAGATAAAAATAATCCTTATAATTTTTGTTTTGAAATTTTATCA AGATAA
Upstream 100 bases:
>100_bases AAATAAATTTAATTAATTAAAAAAATTAAATTTATAACTTTTTATAAATATGTTGTAAAACATATTTATAATTTTAAATT TTAAAAAATCGTAAATTAAG
Downstream 100 bases:
>100_bases AAAAATATATTAATTAAATATTTTTAATTTAATTTTAACTATTGTTTTTTTGAAAAGATTGAAAAAAGTATTTTTTATCT TCCCATCGAAACATGGTTAA
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKISLISAISNNLVIGHNNKIPWYLPEDLKWFKKNTIHKDIIMGRLTWESILNHPLPMRKNIVISHKEIIHKDVIWANSI SKALLSTTYDKEIMVIGGSKIYKQMLFYATKLYLTHVDFNGIGDTYFPQYKSCKFWKTIFRKQHFKDKNNPYNFCFEILS R
Sequences:
>Translated_161_residues MKISLISAISNNLVIGHNNKIPWYLPEDLKWFKKNTIHKDIIMGRLTWESILNHPLPMRKNIVISHKEIIHKDVIWANSI SKALLSTTYDKEIMVIGGSKIYKQMLFYATKLYLTHVDFNGIGDTYFPQYKSCKFWKTIFRKQHFKDKNNPYNFCFEILS R >Mature_161_residues MKISLISAISNNLVIGHNNKIPWYLPEDLKWFKKNTIHKDIIMGRLTWESILNHPLPMRKNIVISHKEIIHKDVIWANSI SKALLSTTYDKEIMVIGGSKIYKQMLFYATKLYLTHVDFNGIGDTYFPQYKSCKFWKTIFRKQHFKDKNNPYNFCFEILS R
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain
Homologues:
Organism=Escherichia coli, GI1786233, Length=159, Percent_Identity=48.4276729559748, Blast_Score=160, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6324810, Length=124, Percent_Identity=30.6451612903226, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): DYR_BUCAP (Q8K9Z8)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660493.1 - ProteinModelPortal: Q8K9Z8 - SMR: Q8K9Z8 - EnsemblBacteria: EBBUCT00000000175 - GeneID: 1005953 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg136 - GeneTree: EBGT00050000007986 - HOGENOM: HBG665708 - OMA: THIDINI - ProtClustDB: CLSK315509 - BioCyc: BAPH198804:BUSG136-MONOMER - InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 - PANTHER: PTHR11549:SF1 - PRINTS: PR00070
Pfam domain/function: PF00186 DHFR_1
EC number: =1.5.1.3
Molecular weight: Translated: 19114; Mature: 19114
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00075 DHFR_1; PS51330 DHFR_2
Important sites: BINDING 28-28 BINDING 59-59 BINDING 115-115
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISLISAISNNLVIGHNNKIPWYLPEDLKWFKKNTIHKDIIMGRLTWESILNHPLPMRK CCEEEEECCCCCEEEECCCCCCEEECHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCC NIVISHKEIIHKDVIWANSISKALLSTTYDKEIMVIGGSKIYKQMLFYATKLYLTHVDFN CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHEEECCC GIGDTYFPQYKSCKFWKTIFRKQHFKDKNNPYNFCFEILSR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKISLISAISNNLVIGHNNKIPWYLPEDLKWFKKNTIHKDIIMGRLTWESILNHPLPMRK CCEEEEECCCCCEEEECCCCCCEEECHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCC NIVISHKEIIHKDVIWANSISKALLSTTYDKEIMVIGGSKIYKQMLFYATKLYLTHVDFN CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHEEECCC GIGDTYFPQYKSCKFWKTIFRKQHFKDKNNPYNFCFEILSR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438