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The map label for this gene is atpH

Identifier: 21672299

GI number: 21672299

Start: 3740

End: 4273

Strand: Direct

Name: atpH

Synonym: BUsg005

Alternate gene names: 21672299

Gene position: 3740-4273 (Clockwise)

Preceding gene: 21672298

Following gene: 21672300

Centisome position: 0.58

GC content: 22.47

Gene sequence:

>534_bases
ATGTCAGTACTTGATACTATTGCTAGACCTTATGCTAAAGCAATTTTTGAATTAGCAATTGAAAATCAATCAATAGAAAA
ATGGAAAAAAACGTTAATTTTTATTAACGAAATCATTCGTTCAAAAAAAATTGAAAAATTTTTATCTGGATCTTTATCAC
CTAGTTATTTATCATCTTTTTTTATCTTTGTTGCTGGTGATCACATTGATAAAGATGCAAGAAATTTAATAAAATTATTA
GCTGAAAATCAGCGTTTTAAAATATTTAATAATATATTGCGACAGTTTTTAAAATTAGAAACATCTTATCAAGGTAATAC
TATTATTGAGTTAATATCAGCATATTCTTTGCAAGAACATGAGATTATTGATATACGTTGTATATTACAAAAAATATTTT
TATCTAAAATTAAATTTATATATAAAATTGATCATCAGATACTTGATGGCATAATTATAAAAAAAGCTGATACAGTTTTT
GATTTTTCTGTTCGTAGTTATCTTAAACAATTATCTGACGTTTTAAATTTTTAA

Upstream 100 bases:

>100_bases
TTATTAAAGACAATATTCAAAAAGATCAATATAAGTATTCAATAAAAAAATTAATTGTTTCTTTATCTAAAGATAAGAAA
TTAATATAGGTAAAATATTA

Downstream 100 bases:

>100_bases
GTGAGCATTGTATATGCAATTAAATTCTACAGAAATTAGTCAATTGATTAAAGAAAGAATTGCTCAATTTGAAGTATTTA
ATCAATCTTATAATGAAGGT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSVLDTIARPYAKAIFELAIENQSIEKWKKTLIFINEIIRSKKIEKFLSGSLSPSYLSSFFIFVAGDHIDKDARNLIKLL
AENQRFKIFNNILRQFLKLETSYQGNTIIELISAYSLQEHEIIDIRCILQKIFLSKIKFIYKIDHQILDGIIIKKADTVF
DFSVRSYLKQLSDVLNF

Sequences:

>Translated_177_residues
MSVLDTIARPYAKAIFELAIENQSIEKWKKTLIFINEIIRSKKIEKFLSGSLSPSYLSSFFIFVAGDHIDKDARNLIKLL
AENQRFKIFNNILRQFLKLETSYQGNTIIELISAYSLQEHEIIDIRCILQKIFLSKIKFIYKIDHQILDGIIIKKADTVF
DFSVRSYLKQLSDVLNF
>Mature_176_residues
SVLDTIARPYAKAIFELAIENQSIEKWKKTLIFINEIIRSKKIEKFLSGSLSPSYLSSFFIFVAGDHIDKDARNLIKLLA
ENQRFKIFNNILRQFLKLETSYQGNTIIELISAYSLQEHEIIDIRCILQKIFLSKIKFIYKIDHQILDGIIIKKADTVFD
FSVRSYLKQLSDVLNF

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=175, Percent_Identity=38.8571428571429, Blast_Score=153, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_BUCAP (O51875)

Other databases:

- EMBL:   AF008210
- EMBL:   AE013218
- RefSeq:   NP_660366.1
- ProteinModelPortal:   O51875
- SMR:   O51875
- EnsemblBacteria:   EBBUCT00000000084
- GeneID:   1005810
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg005
- GeneTree:   EBGT00050000008016
- HOGENOM:   HBG668108
- OMA:   ISKINIM
- ProtClustDB:   PRK05758
- BioCyc:   BAPH198804:BUSG005-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20672; Mature: 20540

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLDTIARPYAKAIFELAIENQSIEKWKKTLIFINEIIRSKKIEKFLSGSLSPSYLSSF
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FIFVAGDHIDKDARNLIKLLAENQRFKIFNNILRQFLKLETSYQGNTIIELISAYSLQEH
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
EIIDIRCILQKIFLSKIKFIYKIDHQILDGIIIKKADTVFDFSVRSYLKQLSDVLNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVLDTIARPYAKAIFELAIENQSIEKWKKTLIFINEIIRSKKIEKFLSGSLSPSYLSSF
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FIFVAGDHIDKDARNLIKLLAENQRFKIFNNILRQFLKLETSYQGNTIIELISAYSLQEH
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
EIIDIRCILQKIFLSKIKFIYKIDHQILDGIIIKKADTVFDFSVRSYLKQLSDVLNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9216881; 9516544; 12089438