| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gumK
Identifier: 77748665
GI number: 77748665
Start: 3035023
End: 3036219
Strand: Reverse
Name: gumK
Synonym: XAC2576
Alternate gene names: NA
Gene position: 3036219-3035023 (Counterclockwise)
Preceding gene: 21243309
Following gene: 21243307
Centisome position: 58.66
GC content: 61.74
Gene sequence:
>1197_bases ATGAGCGACACACCCGCCGCCGCTTCCGGCATCCGCCGGCCTTGCTACCTGGTCTTGTCCGCCCACGATTACCGCACGCC CCGGCGCGCCAATATCCACTTCATCACCGATCAACTGGCATTGCGCGGGACCACGCGGTTCTTCTCGCTGCGTTACAGCC GGTTGTCGCGCATGAAGGGGGATATGCGTCTGCCGCTCGACGAGACCGCAAACGCGGTCGTCTCGCACAAGGGCGTCGAC TGCTACCTGTGGCGCACGACCGTGCATCCGTTCAATACGCGCCGTCCGTGGCTGCGGTCGGTCGAGGATGCGATGTTCCG CTGGTATGCCGCGCATCCGCCGCGCCAGTTACTCGACTGGATGCGCGAGGCAGATGTGATCGTGTTCGAAAGCGGCATTG CGGTCGCTTTCATCGAACTGGCCAAGCGCGTCAATCCCGCAGCCAAGCTGGTGTACCGCGCGTCAGACGGACTGAGCACG ATCAATGTTGCGTCGTATATCGAACGCGAGTTCGACCGCGTGGCACCCAAGCTCGATGTGATTGCACTGGTATCGCCGGC AATGGCAGAAGAAATCGCCAGCCGTGACAATGTCTATCACGTTGGCCATGGTGTAGATCACAACCTGGATCAACTCGGCG ACCCGTCGCCGTACGGCGAGGGCATCCACGCAGTGGCCGTCGGTTCGATGCTGTTCGATCCGGAATTCTTCGTGGTTGCC AGCAAGGCTTTCCCGCAGGTGACGTTTCATGTGATCGGCTCGGGCATGGGGCGGCATCCGGGATACGGCGATAACGTGGT GGTCTACGGCGAGATGAAGCACGCCGAGACCATTGGCTACATCAAGCACGCGCGGTTCGGGATTGCGCCGTATGCCTCCG AGCAGGTGCCGGTCTACCTGGCGGACAGTTCGATGAAGTTGTTGCAATACGACTTTTTCGGCTTGCCTGCGGTGTGTCCG AATGCCGTGGTGGGGCCGTATCAGTCGCGTTTCGGCTACACTCCGGGGAACGCCGATTCTGTCGTTGCGGCAATCGGCCG CGCCCTGGAAGCGCCACGCGTGCGTTATCGCCAGTGCCTGAATTGGTCCGACACCACCGATCGCGTGCTGGATCCCAGTG CGTATCCGGAAACCCGGTTGTATCCACAGCAAAGCGCAGCGGTGCATACCTCGTCGGAGGCTGCGCTCTCGCACTGA
Upstream 100 bases:
>100_bases TCGCAAGCTGCTGACGCAGGCCAAGGCACGTCGATGAGTCGACATCGTCTTCGCCTGCAGTCGGTCATGCTTTCTCTCAC TCATTCATAGGACACGGCCC
Downstream 100 bases:
>100_bases TGCGGCGCACATTTTTTCTTTAGGAGACTCATACGTTATGGCCAACGCCTTGCTGCAGAAATGGATAGAACATGCAGAAC GTCGTGCGCTGTTCTGGTGG
Product: GumK protein
Products: NA
Alternate protein names: UDP-GlcA Beta-Glucuronosyltransferase; GumK-Related Protein; Glucuronyl Transferase; Glucuronosyltransferase; Xanthan Biosynthesis Glucuronosyltransferase GumK
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDETANAVVSHKGVD CYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDWMREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLST INVASYIEREFDRVAPKLDVIALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCP NAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCLNWSDTTDRVLDPSAYPETRLYPQQSAAVHTSSEAALSH
Sequences:
>Translated_398_residues MSDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDETANAVVSHKGVD CYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDWMREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLST INVASYIEREFDRVAPKLDVIALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCP NAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCLNWSDTTDRVLDPSAYPETRLYPQQSAAVHTSSEAALSH >Mature_397_residues SDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKGDMRLPLDETANAVVSHKGVDC YLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDWMREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTI NVASYIEREFDRVAPKLDVIALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVAS KAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPN AVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCLNWSDTTDRVLDPSAYPETRLYPQQSAAVHTSSEAALSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44296; Mature: 44165
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKG CCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCC DMRLPLDETANAVVSHKGVDCYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDW CCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH MREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPKLDV HHHCCEEEEECCHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE IALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA HHHHCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCEEHEEEHHHHCCCCEEEEE SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEE ADSSMKLLQYDFFGLPAVCPNAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCL ECCCCEEHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC NWSDTTDRVLDPSAYPETRLYPQQSAAVHTSSEAALSH CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC >Mature Secondary Structure SDTPAAASGIRRPCYLVLSAHDYRTPRRANIHFITDQLALRGTTRFFSLRYSRLSRMKG CCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCC DMRLPLDETANAVVSHKGVDCYLWRTTVHPFNTRRPWLRSVEDAMFRWYAAHPPRQLLDW CCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH MREADVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPKLDV HHHCCEEEEECCHHHHHHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE IALVSPAMAEEIASRDNVYHVGHGVDHNLDQLGDPSPYGEGIHAVAVGSMLFDPEFFVVA HHHHCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCEEHEEEHHHHCCCCEEEEE SKAFPQVTFHVIGSGMGRHPGYGDNVVVYGEMKHAETIGYIKHARFGIAPYASEQVPVYL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEE ADSSMKLLQYDFFGLPAVCPNAVVGPYQSRFGYTPGNADSVVAAIGRALEAPRVRYRQCL ECCCCEEHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHC NWSDTTDRVLDPSAYPETRLYPQQSAAVHTSSEAALSH CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA