| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is gumL
Identifier: 21243307
GI number: 21243307
Start: 3034191
End: 3034985
Strand: Reverse
Name: gumL
Synonym: XAC2575
Alternate gene names: NA
Gene position: 3034985-3034191 (Counterclockwise)
Preceding gene: 77748665
Following gene: 21243306
Centisome position: 58.64
GC content: 58.99
Gene sequence:
>795_bases ATGGCCAACGCCTTGCTGCAGAAATGGATAGAACATGCAGAACGTCGTGCGCTGTTCTGGTGGCAGCCCAAGAACGCTGG CGTGAATATGGGAGATCACCTGTCCAAGGTGATCGTCTCCTGCGTGCTGTCGTTGCAGGACAAAACGCTGATCGAGAAGC GGGATCTGAGCAAGAAGCTGATCGCGATCGGCTCGGTGCTGCACTTCGCCAAAGACGGCGACACCGTCTGGGGTAGTGGT ATCAACGGCAAGATTCCTGCCGAGCGCAACACCTTCAGTACGCTCGATGTCCGTGCGGTGCGTGGGCCGAAGACGCGCAA GTTTCTGCTCGATCGCGGCATCGCAGTGCCGGAAGTGTATGGCGATCCCGGGCTGCTGACGCCGATGTTCTTCCCGGCCG ATGCGCTCGGCGCGATCAACAAGCGCCCGTTCGCCATCGTTCCGCACTTCAACGAACCGGTCGAAAAGTACAGCGCGTAC AAGGACCACCTGGTATTTCCCAATGTCAAGCCCGCAACCTTCATGAGCGCGTTGCTTGGCGCTGAGTTGGTGATCAGTAG CTTGCTGCACGGCCTGATCCTTGCCGAAGCCTATGGAATCCCGGCGGTGTACCTGGACTGGGGCAACGGCGAAGATCGCT TCAAGTACGACGACTACTACAACGGCACCGGGCGTATGCAGTGGCATTCCGGCAACAGCGTGGAAGAGTGTCTGCAGCTG GGCGGCAACGGCGATTTCGATCTGGAAAGGCTGCAGGCTGGACTGTTGGCTGCCTTCCCTTACGACCTTTGGTGA
Upstream 100 bases:
>100_bases CGGTTGTATCCACAGCAAAGCGCAGCGGTGCATACCTCGTCGGAGGCTGCGCTCTCGCACTGATGCGGCGCACATTTTTT CTTTAGGAGACTCATACGTT
Downstream 100 bases:
>100_bases TTCGATGATGCAGGGCCAGCGCGTGGATGTGGAAACAACGGGGATTGCCAGCGGGGTCACGCCGCCGGGTGTGGTGATTC CGTTGGGCGGCTTTCCGGTG
Product: GumL protein
Products: NA
Alternate protein names: ExoV-Like Protein; ExoV Domain-Containing Protein; GumL Protein; Pyruvyltransferase; Polysaccharide Biosynthesis Protein; Exopolysaccharide Biosynthesis Pyruvyltransferase ExoV
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MANALLQKWIEHAERRALFWWQPKNAGVNMGDHLSKVIVSCVLSLQDKTLIEKRDLSKKLIAIGSVLHFAKDGDTVWGSG INGKIPAERNTFSTLDVRAVRGPKTRKFLLDRGIAVPEVYGDPGLLTPMFFPADALGAINKRPFAIVPHFNEPVEKYSAY KDHLVFPNVKPATFMSALLGAELVISSLLHGLILAEAYGIPAVYLDWGNGEDRFKYDDYYNGTGRMQWHSGNSVEECLQL GGNGDFDLERLQAGLLAAFPYDLW
Sequences:
>Translated_264_residues MANALLQKWIEHAERRALFWWQPKNAGVNMGDHLSKVIVSCVLSLQDKTLIEKRDLSKKLIAIGSVLHFAKDGDTVWGSG INGKIPAERNTFSTLDVRAVRGPKTRKFLLDRGIAVPEVYGDPGLLTPMFFPADALGAINKRPFAIVPHFNEPVEKYSAY KDHLVFPNVKPATFMSALLGAELVISSLLHGLILAEAYGIPAVYLDWGNGEDRFKYDDYYNGTGRMQWHSGNSVEECLQL GGNGDFDLERLQAGLLAAFPYDLW >Mature_263_residues ANALLQKWIEHAERRALFWWQPKNAGVNMGDHLSKVIVSCVLSLQDKTLIEKRDLSKKLIAIGSVLHFAKDGDTVWGSGI NGKIPAERNTFSTLDVRAVRGPKTRKFLLDRGIAVPEVYGDPGLLTPMFFPADALGAINKRPFAIVPHFNEPVEKYSAYK DHLVFPNVKPATFMSALLGAELVISSLLHGLILAEAYGIPAVYLDWGNGEDRFKYDDYYNGTGRMQWHSGNSVEECLQLG GNGDFDLERLQAGLLAAFPYDLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29377; Mature: 29246
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANALLQKWIEHAERRALFWWQPKNAGVNMGDHLSKVIVSCVLSLQDKTLIEKRDLSKKL CCHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAIGSVLHFAKDGDTVWGSGINGKIPAERNTFSTLDVRAVRGPKTRKFLLDRGIAVPEVY HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEC GDPGLLTPMFFPADALGAINKRPFAIVPHFNEPVEKYSAYKDHLVFPNVKPATFMSALLG CCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHH AELVISSLLHGLILAEAYGIPAVYLDWGNGEDRFKYDDYYNGTGRMQWHSGNSVEECLQL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEECCCCEEEECCCCCHHHHHHH GGNGDFDLERLQAGLLAAFPYDLW CCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure ANALLQKWIEHAERRALFWWQPKNAGVNMGDHLSKVIVSCVLSLQDKTLIEKRDLSKKL CHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAIGSVLHFAKDGDTVWGSGINGKIPAERNTFSTLDVRAVRGPKTRKFLLDRGIAVPEVY HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEC GDPGLLTPMFFPADALGAINKRPFAIVPHFNEPVEKYSAYKDHLVFPNVKPATFMSALLG CCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHCCEECCCCCHHHHHHHHHH AELVISSLLHGLILAEAYGIPAVYLDWGNGEDRFKYDDYYNGTGRMQWHSGNSVEECLQL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEECCCCEEEECCCCCHHHHHHH GGNGDFDLERLQAGLLAAFPYDLW CCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA