| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cheW [H]
Identifier: 77748621
GI number: 77748621
Start: 2229212
End: 2230486
Strand: Reverse
Name: cheW [H]
Synonym: XAC1906
Alternate gene names: 77748621
Gene position: 2230486-2229212 (Counterclockwise)
Preceding gene: 21242651
Following gene: 21242649
Centisome position: 43.1
GC content: 68.78
Gene sequence:
>1275_bases ATGAGCAACTCCACCGCCAACGGTGAATTGGACGATTATCTGGAAGGCCTGCTGCACGATGCGGGCGTGGAGATCGTCGC CCCGCCCGCGGCCACCGCAGCGACGGTCGATACGCCGCCAATTGCGGATGCCGATCTCGCGCTGGCCGAGCCGCCGGTCG AGACGGCCGCACTTCCCGAAGCCGCTACTGTCTCCGAGGCTGCCACCTCCAACGCGATTGCCGCGGTGCGTAGCGCCGAT GCGATCGCCGCCGATTTCCTGGCAGAAATGGACGCCGACCCGGCATTCGCCCCCCCGGTCAAGGCCGCGCCCAGCGCTGC CGACATCGCCGCCGACTTTCTGGCCGAAATGGATGCCGACCCGGCATTCGCTCCGCCGGTCAAGGCCGCACCCAGCGCCG CCGACATCGCCGCCGACTTTCTGGCCGAAATGGATGCCGACCCGGCATTCGCTCCGCCGGTCAAGGCCGCACCCAGCGCT GCGGACATCGCCGCCGACTTTCTGGCCGAAATGGATGCCGACCCGGCGTTCGCTCCGCCGGTCAACGCCGCGCCCAGCGC TGCCGACATCGCCGCCGACTTTCTGGCCGAAATGGATGCCGACCCGGCGTTCGGAGCCGCACCCACCGCAGTGGACCTGA TCACCGCAGATCTGCTGGCAGAAATGGATGCCGACCCCGCCTTCGGACTGGAGGCTGCACCGGTCGCGGCGCTCGCACCA GCCCCGGTCCCAGCGCCCGCCCTGCCCCCGCGTGCAGCACCCGCGCCGGCACGCGCTCCGGCACCGACCGGGCTGCAGGC ACTGCTGGCGCCTGGCCAGGCCGACAAGATTCACGCCGAACGCCGCGCCAGCGAACGCAGCACCCGCTGGCTGCGTCTGC GCTGCGGCGAACAGACCTATGCGCTGGAATTGCTCAAGGTGCAGGAAGTGGTGTTGCCGGTGCCGCTGCTGCCGCTGCGC GGCACGCCCAGCGCCATGCTCGGCATCATGAACCTGCGCGGCCAGGTGGTCCCGGTGATCGATCTGGGCATCCACCTGGG CTCCTCGCCGGTGGACATGGATCTGCAGACCCGCGTGGTGGTCCTGGAAGAAAACGGCGAAACCATGGGCCTGCGCGTGT CGGCCGTGGAAGACGTCACCAGCCTCACCGATCAGCAGATCGAGCCGCCGGACAACGCGCGCCTGTGCCGCATCTACAAC AACCTGTTCCGCGGTGTCGCACGTCTTGGCCATCAGCCGATGATCCTGCTCGATGCCACCCATCTGCTGCATTGA
Upstream 100 bases:
>100_bases CTGCCGTTGGCGGCGACTATCAGGGCCGCGGTCTGTCCGCGTATCGCCGCGCGCTGGAATGGGTGCTGGCCGATGACGCG ATGCGTATGGAGCAAGCCGC
Downstream 100 bases:
>100_bases TGCGCGCCTAGCTTGCCCGCACCTGCACGCACGACGATTCACCGTTAAAGCTTTTCCGCCCCCCGCCGTTAGTACGCATA GAACCATCCGTTCGGAGCAA
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSNSTANGELDDYLEGLLHDAGVEIVAPPAATAATVDTPPIADADLALAEPPVETAALPEAATVSEAATSNAIAAVRSAD AIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSA ADIAADFLAEMDADPAFAPPVNAAPSAADIAADFLAEMDADPAFGAAPTAVDLITADLLAEMDADPAFGLEAAPVAALAP APVPAPALPPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTYALELLKVQEVVLPVPLLPLR GTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVVVLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYN NLFRGVARLGHQPMILLDATHLLH
Sequences:
>Translated_424_residues MSNSTANGELDDYLEGLLHDAGVEIVAPPAATAATVDTPPIADADLALAEPPVETAALPEAATVSEAATSNAIAAVRSAD AIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSA ADIAADFLAEMDADPAFAPPVNAAPSAADIAADFLAEMDADPAFGAAPTAVDLITADLLAEMDADPAFGLEAAPVAALAP APVPAPALPPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTYALELLKVQEVVLPVPLLPLR GTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVVVLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYN NLFRGVARLGHQPMILLDATHLLH >Mature_423_residues SNSTANGELDDYLEGLLHDAGVEIVAPPAATAATVDTPPIADADLALAEPPVETAALPEAATVSEAATSNAIAAVRSADA IAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAA DIAADFLAEMDADPAFAPPVNAAPSAADIAADFLAEMDADPAFGAAPTAVDLITADLLAEMDADPAFGLEAAPVAALAPA PVPAPALPPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTYALELLKVQEVVLPVPLLPLRG TPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVVVLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYNN LFRGVARLGHQPMILLDATHLLH
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=149, Percent_Identity=33.5570469798658, Blast_Score=75, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 43474; Mature: 43343
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSTANGELDDYLEGLLHDAGVEIVAPPAATAATVDTPPIADADLALAEPPVETAALPE CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCC AATVSEAATSNAIAAVRSADAIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPP CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC VNAAPSAADIAADFLAEMDADPAFGAAPTAVDLITADLLAEMDADPAFGLEAAPVAALAP CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC APVPAPALPPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCHHH ALELLKVQEVVLPVPLLPLRGTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECEECCCCCCCCCCCEEEE VLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYNNLFRGVARLGHQPMILLDAT EEECCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECH HLLH HHCC >Mature Secondary Structure SNSTANGELDDYLEGLLHDAGVEIVAPPAATAATVDTPPIADADLALAEPPVETAALPE CCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCC AATVSEAATSNAIAAVRSADAIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PAFAPPVKAAPSAADIAADFLAEMDADPAFAPPVKAAPSAADIAADFLAEMDADPAFAPP CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC VNAAPSAADIAADFLAEMDADPAFGAAPTAVDLITADLLAEMDADPAFGLEAAPVAALAP CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC APVPAPALPPRAAPAPARAPAPTGLQALLAPGQADKIHAERRASERSTRWLRLRCGEQTY CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCHHH ALELLKVQEVVLPVPLLPLRGTPSAMLGIMNLRGQVVPVIDLGIHLGSSPVDMDLQTRVV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECEECCCCCCCCCCCEEEE VLEENGETMGLRVSAVEDVTSLTDQQIEPPDNARLCRIYNNLFRGVARLGHQPMILLDAT EEECCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECH HLLH HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]