| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 77748608
Identifier: 77748608
GI number: 77748608
Start: 2013498
End: 2014169
Strand: Reverse
Name: 77748608
Synonym: XAC1754
Alternate gene names: NA
Gene position: 2014169-2013498 (Counterclockwise)
Preceding gene: 21242501
Following gene: 21242499
Centisome position: 38.92
GC content: 67.71
Gene sequence:
>672_bases ATGGGAATCCTGCTGCCGCGCTGGGTCTGGGTTGGCGCGGTGGCATTGTCGGCCGTGGCCGGCATGGTCAATGTGGTGGG CTACCTGGGCTCCGAGCACCAGGTGGTCAGCCACCTCACCGGCACGACCAGTCTGCTTGGCGTTGCCCTGGCGCAAAACA CCGCACCGGACATCGGCTTTCTCTGCGGCGTCCTCATCGCCTTCTGCGCAGGCGCCATGCTCAGCGGACTGATCATCGAG GACGATGTCTTGCGGCTTGGACAGCGCTACGGCGCCGCGCTGATGATCGAGGCGCTGCCGTTGCTGGGCGCGACTGCGCT GTTCAAGTTGCATCATCTCGGCGGCGTCCTGTGCGCCGCTGGCGCCTGCGGCCTGCAGAATGCGATGGCGACCAGCCTCA GCGGCGCCGCGGTCCGTACCACGCATCTGAGCGGCATGTTCACCGACCTGGGCATCGGCCTGGGACACCTGCTGCGCGGG CGCCCGCTGCAGGTGCGCCGCCTCGCGCTGAGCGCGCTGATCATCAGCGGCTTTCTGGGCGGCAGCATCCTCGGTACCTT GCTGTTCCAGCGCTGGCAGTACGACGCGCTCTACCTGCCCGCCAGCCTCACCGGATCGACCGGCGCTGGCTATGTCGCCT ACCTGCAATGGCGTCGCTGGCGCACAGGATGA
Upstream 100 bases:
>100_bases CAGGTCTGCGACGGCGGCAGCATGTTCTGGGGCGCGCTGTACGAGCCGCAGACCGGCGCGTTCTCGCAGATTGCAATCAA CGGTAGCCCCTGAACCCGAG
Downstream 100 bases:
>100_bases TGTGCACATCCTCCAGCCAGCAGTGCAGAATCGCCACATGACTACGCCCAGTACGCTGTCTGCATTGAGCATCGCCGGCT CCGACTCCGGCGGGGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGILLPRWVWVGAVALSAVAGMVNVVGYLGSEHQVVSHLTGTTSLLGVALAQNTAPDIGFLCGVLIAFCAGAMLSGLIIE DDVLRLGQRYGAALMIEALPLLGATALFKLHHLGGVLCAAGACGLQNAMATSLSGAAVRTTHLSGMFTDLGIGLGHLLRG RPLQVRRLALSALIISGFLGGSILGTLLFQRWQYDALYLPASLTGSTGAGYVAYLQWRRWRTG
Sequences:
>Translated_223_residues MGILLPRWVWVGAVALSAVAGMVNVVGYLGSEHQVVSHLTGTTSLLGVALAQNTAPDIGFLCGVLIAFCAGAMLSGLIIE DDVLRLGQRYGAALMIEALPLLGATALFKLHHLGGVLCAAGACGLQNAMATSLSGAAVRTTHLSGMFTDLGIGLGHLLRG RPLQVRRLALSALIISGFLGGSILGTLLFQRWQYDALYLPASLTGSTGAGYVAYLQWRRWRTG >Mature_222_residues GILLPRWVWVGAVALSAVAGMVNVVGYLGSEHQVVSHLTGTTSLLGVALAQNTAPDIGFLCGVLIAFCAGAMLSGLIIED DVLRLGQRYGAALMIEALPLLGATALFKLHHLGGVLCAAGACGLQNAMATSLSGAAVRTTHLSGMFTDLGIGLGHLLRGR PLQVRRLALSALIISGFLGGSILGTLLFQRWQYDALYLPASLTGSTGAGYVAYLQWRRWRTG
Specific function: Unknown
COG id: COG3619
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23272; Mature: 23141
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILLPRWVWVGAVALSAVAGMVNVVGYLGSEHQVVSHLTGTTSLLGVALAQNTAPDIGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH LCGVLIAFCAGAMLSGLIIEDDVLRLGQRYGAALMIEALPLLGATALFKLHHLGGVLCAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GACGLQNAMATSLSGAAVRTTHLSGMFTDLGIGLGHLLRGRPLQVRRLALSALIISGFLG CCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GSILGTLLFQRWQYDALYLPASLTGSTGAGYVAYLQWRRWRTG HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure GILLPRWVWVGAVALSAVAGMVNVVGYLGSEHQVVSHLTGTTSLLGVALAQNTAPDIGF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH LCGVLIAFCAGAMLSGLIIEDDVLRLGQRYGAALMIEALPLLGATALFKLHHLGGVLCAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GACGLQNAMATSLSGAAVRTTHLSGMFTDLGIGLGHLLRGRPLQVRRLALSALIISGFLG CCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GSILGTLLFQRWQYDALYLPASLTGSTGAGYVAYLQWRRWRTG HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA