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The map label for this gene is dapD [H]

Identifier: 77748586

GI number: 77748586

Start: 1648621

End: 1649478

Strand: Direct

Name: dapD [H]

Synonym: XAC1430

Alternate gene names: 77748586

Gene position: 1648621-1649478 (Clockwise)

Preceding gene: 21242182

Following gene: 21242184

Centisome position: 31.85

GC content: 63.75

Gene sequence:

>858_bases
GTGCACAGCGCCTCCACGCAGGTCGGCAGCGACGAACTCAAACTGGGCATCGAAAGCGCATTCGAACGGCGCGCCACGCT
GACCATGGACGAGATCGACGGTTCCACCCGTGCCATTGTCACCCGCGTGATCGACGGACTGGAAAGCGGGCAGTTCCGCG
TCGCCGAGCCGGACGGGCAGGGCGGCTGGACCGTCAACGAATGGCTGAAAAAAGCGGTGCTGCTGTATTTCCGCGTCAAC
GAGATGGCAGTGATCGACGCCCAGCCAGCGCCGTTCTGGGACAAGGTGGAATCGCGCTTTGCCGGCTTCCATGAAGCCGA
ATTCCGCAAGGCCGGCGTGCGCGTCGTGCCGGGTGCGGTGGCGCGTCGCGGCAGTTACTTCGGCAAGGACGTGGTGCTGA
TGCCGAGTTTCACCAACATCGGTGCCTATGTCGGCGAAGGCACCATGGTCGATACCTGGGCTACCGTGGGGTCGTGCGCG
CAGATCGGCAAGCACTGCCATTTGTCCGGCGGCGCCGGCATCGGCGGCGTACTCGAACCGCTGCAGGCCAGTCCCACCAT
CATCGAAGATCACTGCTTCATCGGTGCGCGCTCGGAGGTGGTGGAAGGCGTGGTCATCGGGCACCACAGCGTGATCGGCA
TGGGCGTGTTCATCGGCCAGAGCACACGCATCTACAACCGCGCCACCGGCGAGATTTCTTACGGCTATGTGCCGCCGTAC
AGCGTGGTGGTGTCCGGGCAGTTGCCCTCCAAGGACGGCTCGCACTCGCTGTATTGCGCGGTGATCGTCAAGCAGGTGGA
TGCCAAGACGCGCAGCAAGACCAGCGTCAACGAACTGTTGCGCGGTCTGGCGGATTAA

Upstream 100 bases:

>100_bases
CGCTGCACCGCGCGTGGCCAGGCAGCCGACCAAGGTGGTTGCTGCACCGGCCGCAAAGAAGGCCGCTGCGGCAAAGAAGC
TGCCGATTGCCGAGCAGGCC

Downstream 100 bases:

>100_bases
TCCATTTCGCATCCGCAACAGCTGCCGCGCAGCGCCGGCCAAGGATGCGCCTTTGGCGCGCTCGGTTGCTGCAATGACAC
GCGCGTCCCAACGCGCTTGC

Product: 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-succinyltransferase; THDP succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MHSASTQVGSDELKLGIESAFERRATLTMDEIDGSTRAIVTRVIDGLESGQFRVAEPDGQGGWTVNEWLKKAVLLYFRVN
EMAVIDAQPAPFWDKVESRFAGFHEAEFRKAGVRVVPGAVARRGSYFGKDVVLMPSFTNIGAYVGEGTMVDTWATVGSCA
QIGKHCHLSGGAGIGGVLEPLQASPTIIEDHCFIGARSEVVEGVVIGHHSVIGMGVFIGQSTRIYNRATGEISYGYVPPY
SVVVSGQLPSKDGSHSLYCAVIVKQVDAKTRSKTSVNELLRGLAD

Sequences:

>Translated_285_residues
MHSASTQVGSDELKLGIESAFERRATLTMDEIDGSTRAIVTRVIDGLESGQFRVAEPDGQGGWTVNEWLKKAVLLYFRVN
EMAVIDAQPAPFWDKVESRFAGFHEAEFRKAGVRVVPGAVARRGSYFGKDVVLMPSFTNIGAYVGEGTMVDTWATVGSCA
QIGKHCHLSGGAGIGGVLEPLQASPTIIEDHCFIGARSEVVEGVVIGHHSVIGMGVFIGQSTRIYNRATGEISYGYVPPY
SVVVSGQLPSKDGSHSLYCAVIVKQVDAKTRSKTSVNELLRGLAD
>Mature_285_residues
MHSASTQVGSDELKLGIESAFERRATLTMDEIDGSTRAIVTRVIDGLESGQFRVAEPDGQGGWTVNEWLKKAVLLYFRVN
EMAVIDAQPAPFWDKVESRFAGFHEAEFRKAGVRVVPGAVARRGSYFGKDVVLMPSFTNIGAYVGEGTMVDTWATVGSCA
QIGKHCHLSGGAGIGGVLEPLQASPTIIEDHCFIGARSEVVEGVVIGHHSVIGMGVFIGQSTRIYNRATGEISYGYVPPY
SVVVSGQLPSKDGSHSLYCAVIVKQVDAKTRSKTSVNELLRGLAD

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; fourth step. [C]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=273, Percent_Identity=65.2014652014652, Blast_Score=338, Evalue=3e-94,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005664
- InterPro:   IPR023180
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =2.3.1.117 [H]

Molecular weight: Translated: 30579; Mature: 30579

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSASTQVGSDELKLGIESAFERRATLTMDEIDGSTRAIVTRVIDGLESGQFRVAEPDGQ
CCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCC
GGWTVNEWLKKAVLLYFRVNEMAVIDAQPAPFWDKVESRFAGFHEAEFRKAGVRVVPGAV
CCCCHHHHHHHHHEEEEEECCEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCEECCHHH
ARRGSYFGKDVVLMPSFTNIGAYVGEGTMVDTWATVGSCAQIGKHCHLSGGAGIGGVLEP
HHCCCCCCCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHCCEEECCCCCCCCHHHHH
LQASPTIIEDHCFIGARSEVVEGVVIGHHSVIGMGVFIGQSTRIYNRATGEISYGYVPPY
HCCCCCEEECCEEECCHHHHHCEEEECCCHHEEEEEEECCCCEEEECCCCCEEECCCCCE
SVVVSGQLPSKDGSHSLYCAVIVKQVDAKTRSKTSVNELLRGLAD
EEEEECCCCCCCCCCCEEEEEEHHHHCCHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MHSASTQVGSDELKLGIESAFERRATLTMDEIDGSTRAIVTRVIDGLESGQFRVAEPDGQ
CCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCC
GGWTVNEWLKKAVLLYFRVNEMAVIDAQPAPFWDKVESRFAGFHEAEFRKAGVRVVPGAV
CCCCHHHHHHHHHEEEEEECCEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCEECCHHH
ARRGSYFGKDVVLMPSFTNIGAYVGEGTMVDTWATVGSCAQIGKHCHLSGGAGIGGVLEP
HHCCCCCCCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHCCEEECCCCCCCCHHHHH
LQASPTIIEDHCFIGARSEVVEGVVIGHHSVIGMGVFIGQSTRIYNRATGEISYGYVPPY
HCCCCCEEECCEEECCHHHHHCEEEECCCHHEEEEEEECCCCEEEECCCCCEEECCCCCE
SVVVSGQLPSKDGSHSLYCAVIVKQVDAKTRSKTSVNELLRGLAD
EEEEECCCCCCCCCCCEEEEEEHHHHCCHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]