| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is yffB [H]
Identifier: 21242184
GI number: 21242184
Start: 1649668
End: 1650024
Strand: Direct
Name: yffB [H]
Synonym: XAC1431
Alternate gene names: 21242184
Gene position: 1649668-1650024 (Clockwise)
Preceding gene: 77748586
Following gene: 21242185
Centisome position: 31.87
GC content: 58.82
Gene sequence:
>357_bases ATGACCACGCTCTACGGACTCAAAAACTGCGATACCTGCAAGAAAGCCACCAAGTGGCTGGATCGTTTTGGTGTGGCGTA TACGTTTGTCGACTATCGCGATCACAAGCCGGAGCCGCAGACCCTGGCGGAGTGGGCGGAGCAGGTCGGTGGATTCGATG TGTTGATCAACAAGTCCTCTACCACGTGGCGGCAGTTGCCGGACAACCGCAAGGCGGCGGGCAGTGCAGCCGAATGGAAG CTGTTGCTGCGCGAGTACCCGCAGCTGATCCGGCGGCCGCTTGTCATCGCCGACGATGGCGCCCTGCATCAGGGCTTTTC CGATAACGGCTTCAAGAAGCTATTCGGCATTGGCTAA
Upstream 100 bases:
>100_bases AACGCGCTTGCAAGTCGCTTGCCGGTCGCTTCGCGCGCAGTTCCATCGCAACCCCTTTCGATAAGCGAGGGGCTCTGCAC CGCCCTTGGGGATATTTCGC
Downstream 100 bases:
>100_bases GCGACTGCGGTTTCCGACGGTGCCGCGGACCGTGTTGCCGCTATCGTCGCGACGCGTTACGTCTCGCACGCTGATCGCGC GCTCATCCGCTGGGCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTTLYGLKNCDTCKKATKWLDRFGVAYTFVDYRDHKPEPQTLAEWAEQVGGFDVLINKSSTTWRQLPDNRKAAGSAAEWK LLLREYPQLIRRPLVIADDGALHQGFSDNGFKKLFGIG
Sequences:
>Translated_118_residues MTTLYGLKNCDTCKKATKWLDRFGVAYTFVDYRDHKPEPQTLAEWAEQVGGFDVLINKSSTTWRQLPDNRKAAGSAAEWK LLLREYPQLIRRPLVIADDGALHQGFSDNGFKKLFGIG >Mature_117_residues TTLYGLKNCDTCKKATKWLDRFGVAYTFVDYRDHKPEPQTLAEWAEQVGGFDVLINKSSTTWRQLPDNRKAAGSAAEWKL LLREYPQLIRRPLVIADDGALHQGFSDNGFKKLFGIG
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=116, Percent_Identity=37.9310344827586, Blast_Score=86, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13407; Mature: 13276
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLYGLKNCDTCKKATKWLDRFGVAYTFVDYRDHKPEPQTLAEWAEQVGGFDVLINKSS CCCCCCCCCCHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC TTWRQLPDNRKAAGSAAEWKLLLREYPQLIRRPLVIADDGALHQGFSDNGFKKLFGIG CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure TTLYGLKNCDTCKKATKWLDRFGVAYTFVDYRDHKPEPQTLAEWAEQVGGFDVLINKSS CCCCCCCCCHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC TTWRQLPDNRKAAGSAAEWKLLLREYPQLIRRPLVIADDGALHQGFSDNGFKKLFGIG CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644752; 9205837; 9278503; 10493123 [H]