| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 77748578
Identifier: 77748578
GI number: 77748578
Start: 1555884
End: 1558724
Strand: Direct
Name: 77748578
Synonym: XAC1349
Alternate gene names: NA
Gene position: 1555884-1558724 (Clockwise)
Preceding gene: 21242091
Following gene: 21242106
Centisome position: 30.06
GC content: 67.23
Gene sequence:
>2841_bases ATGAAGAAGCAAGACGTCGCCAGAACTGTGCTGGCCTCGGCGCTGGCCGTTGCGTTGTCCGCCTGTGGCGGCGGCGGTGG CGGGGGCGGTATCCGTCCAAGCACCCCGGCCGCACCGCCGGTGACCTCGCCACCGCCGCCACCGCCACCGACCTCGCCGC CGCCGCCGCCAGTAACGACGCCAACGACGCCGGAGCCGGCGATCGATGCGCATCTGGCACTGACCAACGCGCGTGCGGCG CAGGCGCTTGGCTTTACGGGTGCGGGGTATCGCATCGGTGTCATCGATACCGGCATCAATGCCAATCATCCGGCGTTGCA GGGGCGCGTCAGCGACAGCTTCATCTATGTGGATCCACGCACCAACAACACCGCGGTGGGCGATGTGGTCGGGCACGGGA CCGTGGTGGCCGAGCTGGCCGCCGGGCGTGCGGTCGGGCAATGGCCCGGCGGCATCGCGCCGGGTGCGGGCCTGGTGTCT GCGCGCATCATCAGCGACCGTGCGCCGGAGGATGACGGCAGCGGCGACGGCAACGAGGTCGATGGGCCGCTTGGTCTGGG GCCGGTGCATGCCGATCTGATCAGCGCCGGGGTTCGCATCATGAACAATTCGTGGGGCGGCCTGTTTTGGAACGACCCGA CGGTGACCAATCAGATTGCGCAGGAATACCGCCCTTTCATCCTCAGTCACGATGGGCTGGTGGTGTTCGCGTCGGGCAAT GAATCGCGCTCGCAGCCTTCCGATACGGCGGCGCTGCCCAGTCAGCCTGGCCCGAACGGAACGCTGCCGGCGGCCGATCT GGAACGCGGTTGGTTGGTGGTCGGCGCGCTGGATACCGCCAACCCGACGCAACTGGCGTCGTACTCCAACGCCTGTGGTG TGGCGATGCGCTACTGCCTGGTCGCGCCGGGCACCTCGCTGTTCATCGACCCGGACGCCACCGCCGGCAACATCCGTTAT TTCTACGGCAGCGGCACCTCGTTCGCAGCGCCGCTGGTCTCCGGTGCGGCCGCGCTGGTGTGGCAGGCATTTCCGTATTT CAACAATGATCTGGTGCGCCAGACCTTGCTGGGAACTGCCACCGACTTGGGGGCCGCGGGTGTCGACCCGGTATTCGGCT ACGGCCTGCTCGACGTCGGCAAGGCGGTGCTGGGGCCGGCACGCTTCGATTGGGGCACGGTGGAGGTCGATGTCACCACC TTGCGTTCGACCTGGGCCAACGACATCAGTGGCACCGGCGGGCTGACCAAGCGCGGCACCGGCGCGTTGGTATTGAGCAG CACGGCCAATACCTTCACCGGCGATACCCAGGTACTCGGCGGCACCTTGCAGACCGCCAGCTTGCAGAGTGCGCGCGTGA GCATCGCCAACGGCGCGCGCCTGGTCGGCGCGGGCAGCATCGGTGGTCGGGTCGACAACGCCGGGACCTTGCAGGTCAAC GGCGCGACCGCGTCCATTGCCGGCAACTACACCCAGGCCAGCAACGGTCGCCTGGCAGTGAATGTGGGTGACCGTTTGAA TGTCGCGGGCACGGCGACCATCGCAGGCGACCTGCAATTGCTCGGTCGGCGCGACTACGTCGTCAACAACACGACCTACG CAGTACTGCAGGCGACCAATGGTCTGCAGGGCACATTCGACACGCTGAGCAGCGGGCCGGCGGTGACCTTTCTGAGCGCC ACGCGCAGCTACGACGCCAACACCGCGTATGTGTCGCTGCAGCGCATGGATGTCACCGCGGTCGCCGCGTCGCTGGGCGC GATCGGCACCGCATCGATGGATGCGGCCATCCGCGTCGAGCAGGCGTTCCAGCAGGTCGATGCGCAGCAGTTCCAGGGCA ATGGCGCACTCAGCGGCGCCTTCATTCGCGCTGCAGCCGCCTTGCAACAATCGCCCACGGCCAAGGCCGCCGCGGATTCG CTGCGCAGCCTATCCGGCCGTGCGCATGCCGACTCTGCGGCGATGACCTTCGACACCATCGATCTGGGTCGCCGCGCACT GGCAGCGCATTTCGATGGTCTCTCGCAACAGCCGCGTCTGCTGGGCAACTGGCAGCGGGCACTTGGCGGGCCGGGCGAGG GCGGTGCAACCACTTCGGGCTTTGCCACCTCCGGCTGGATGATGGGCAACGATCTGCGTTTGGCCTCCGGTGCGGTCACC GGGTTTGCGTTCGGCGAAACGCGCTCCAGCAGCCTGGGCGACCTGGATGGGGCACGCGGGCGCGATCGTCAGGTGCAGGC GCAGCTGTATTGGGGCACGACATTGGGCGCCGCGTACACGTTGGGCCAGATGGGCTTTGGCAACGTCAATCGTCAGATCG AGCGCACCCTGCAGCTGGGCGAAGACCGCAGCAGCGCCTTCAGCGACTACAGCGGCAGTTACCTCAGCAGCAATCTGGAA ACCGGGTACCGCCTGGGCGGTGCGCATGCGAGCCTGACGCCGTATATGGGCCTGGATTATGTGCGTTTGCGCAGCGATGG CTTCCGCGAAAGCGGCGGCGATGGTTTCGGCCTGCGTGCCAACGCGAGTACGTCCTCGCGCGCGCAGGCGCTTGCCGGCG TGCGCTCGGCGTATCACTGGCGCGGTATCCAGTTGGGCGGTTACGCCGAATGGCAGCAAGCGCTGAGCAGCGATGGCTTG ACGCTGGATGCCAGCTTCGTCGGGGTGGATGCGTGGGCACCGCTGCGTGGCATGCAACCGGCACGCTCGGGTGGTCTGTT CGGCATCACTGCTGCAGCACCGCTTGGCCAGCAGAGCCAGCTGCGTTTCGGTTACGACCAGCGGGTGGGCGAGCGCGGCG ACGACCGTGCGCTGAGCCTGCGATACAGCGCCGATTTCTGA
Upstream 100 bases:
>100_bases GCGCGCGCCCCACGCGCCCGCTTTCCGATTTAAAGTAAGCAAAGCGTTATTCGGGCCCGGCTTGGGCCCCATCCATGGAA TGGGTTCGGGGAGAACACCA
Downstream 100 bases:
>100_bases TCGGCGCCTTGCCTGGCTGAGGCATGTGGTCCCTGTCCAGGCAGCGTGCCTGGACAGGGTTTCACTCGCCGCGCAGCTTG TGCAGGAAGCGCGGTGCGGT
Product: serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 946; Mature: 946
Protein sequence:
>946_residues MKKQDVARTVLASALAVALSACGGGGGGGGIRPSTPAAPPVTSPPPPPPPTSPPPPPVTTPTTPEPAIDAHLALTNARAA QALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLVS ARIISDRAPEDDGSGDGNEVDGPLGLGPVHADLISAGVRIMNNSWGGLFWNDPTVTNQIAQEYRPFILSHDGLVVFASGN ESRSQPSDTAALPSQPGPNGTLPAADLERGWLVVGALDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRY FYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLDVGKAVLGPARFDWGTVEVDVTT LRSTWANDISGTGGLTKRGTGALVLSSTANTFTGDTQVLGGTLQTASLQSARVSIANGARLVGAGSIGGRVDNAGTLQVN GATASIAGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYAVLQATNGLQGTFDTLSSGPAVTFLSA TRSYDANTAYVSLQRMDVTAVAASLGAIGTASMDAAIRVEQAFQQVDAQQFQGNGALSGAFIRAAAALQQSPTAKAAADS LRSLSGRAHADSAAMTFDTIDLGRRALAAHFDGLSQQPRLLGNWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVT GFAFGETRSSSLGDLDGARGRDRQVQAQLYWGTTLGAAYTLGQMGFGNVNRQIERTLQLGEDRSSAFSDYSGSYLSSNLE TGYRLGGAHASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRAQALAGVRSAYHWRGIQLGGYAEWQQALSSDGL TLDASFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF
Sequences:
>Translated_946_residues MKKQDVARTVLASALAVALSACGGGGGGGGIRPSTPAAPPVTSPPPPPPPTSPPPPPVTTPTTPEPAIDAHLALTNARAA QALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLVS ARIISDRAPEDDGSGDGNEVDGPLGLGPVHADLISAGVRIMNNSWGGLFWNDPTVTNQIAQEYRPFILSHDGLVVFASGN ESRSQPSDTAALPSQPGPNGTLPAADLERGWLVVGALDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRY FYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLDVGKAVLGPARFDWGTVEVDVTT LRSTWANDISGTGGLTKRGTGALVLSSTANTFTGDTQVLGGTLQTASLQSARVSIANGARLVGAGSIGGRVDNAGTLQVN GATASIAGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYAVLQATNGLQGTFDTLSSGPAVTFLSA TRSYDANTAYVSLQRMDVTAVAASLGAIGTASMDAAIRVEQAFQQVDAQQFQGNGALSGAFIRAAAALQQSPTAKAAADS LRSLSGRAHADSAAMTFDTIDLGRRALAAHFDGLSQQPRLLGNWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVT GFAFGETRSSSLGDLDGARGRDRQVQAQLYWGTTLGAAYTLGQMGFGNVNRQIERTLQLGEDRSSAFSDYSGSYLSSNLE TGYRLGGAHASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRAQALAGVRSAYHWRGIQLGGYAEWQQALSSDGL TLDASFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF >Mature_946_residues MKKQDVARTVLASALAVALSACGGGGGGGGIRPSTPAAPPVTSPPPPPPPTSPPPPPVTTPTTPEPAIDAHLALTNARAA QALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLVS ARIISDRAPEDDGSGDGNEVDGPLGLGPVHADLISAGVRIMNNSWGGLFWNDPTVTNQIAQEYRPFILSHDGLVVFASGN ESRSQPSDTAALPSQPGPNGTLPAADLERGWLVVGALDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRY FYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLDVGKAVLGPARFDWGTVEVDVTT LRSTWANDISGTGGLTKRGTGALVLSSTANTFTGDTQVLGGTLQTASLQSARVSIANGARLVGAGSIGGRVDNAGTLQVN GATASIAGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYAVLQATNGLQGTFDTLSSGPAVTFLSA TRSYDANTAYVSLQRMDVTAVAASLGAIGTASMDAAIRVEQAFQQVDAQQFQGNGALSGAFIRAAAALQQSPTAKAAADS LRSLSGRAHADSAAMTFDTIDLGRRALAAHFDGLSQQPRLLGNWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVT GFAFGETRSSSLGDLDGARGRDRQVQAQLYWGTTLGAAYTLGQMGFGNVNRQIERTLQLGEDRSSAFSDYSGSYLSSNLE TGYRLGGAHASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRAQALAGVRSAYHWRGIQLGGYAEWQQALSSDGL TLDASFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase S8 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013425 - InterPro: IPR006315 - InterPro: IPR011050 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF03797 Autotransporter; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 97153; Mature: 97153
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQDVARTVLASALAVALSACGGGGGGGGIRPSTPAAPPVTSPPPPPPPTSPPPPPVTT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTTPEPAIDAHLALTNARAAQALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPR CCCCCCCCCEEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEECCC TNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLVSARIISDRAPEDDGSGDGNEV CCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCCCCCCCCCCCCC DGPLGLGPVHADLISAGVRIMNNSWGGLFWNDPTVTNQIAQEYRPFILSHDGLVVFASGN CCCCCCCHHHHHHHHHCEEEEECCCCCEEECCCHHHHHHHHHCCCEEEECCCEEEEECCC ESRSQPSDTAALPSQPGPNGTLPAADLERGWLVVGALDTANPTQLASYSNACGVAMRYCL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHH VAPGTSLFIDPDATAGNIRYFYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTA CCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TDLGAAGVDPVFGYGLLDVGKAVLGPARFDWGTVEVDVTTLRSTWANDISGTGGLTKRGT HHCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCCC GALVLSSTANTFTGDTQVLGGTLQTASLQSARVSIANGARLVGAGSIGGRVDNAGTLQVN CEEEEECCCCCCCCCCHHCCCEEECCCCCHHEEEECCCCEEEECCCCCCCCCCCCEEEEC GATASIAGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYAVLQATN CCEEEEECCCEECCCCEEEEECCCCCCCCEEEEEECCHHEECCCCEEECCCEEEEEEECC GLQGTFDTLSSGPAVTFLSATRSYDANTAYVSLQRMDVTAVAASLGAIGTASMDAAIRVE CCCCCHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHH QAFQQVDAQQFQGNGALSGAFIRAAAALQQSPTAKAAADSLRSLSGRAHADSAAMTFDTI HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHH DLGRRALAAHFDGLSQQPRLLGNWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVT HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEECCCEE GFAFGETRSSSLGDLDGARGRDRQVQAQLYWGTTLGAAYTLGQMGFGNVNRQIERTLQLG EEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC EDRSSAFSDYSGSYLSSNLETGYRLGGAHASLTPYMGLDYVRLRSDGFRESGGDGFGLRA CCHHHHHCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEE NASTSSRAQALAGVRSAYHWRGIQLGGYAEWQQALSSDGLTLDASFVGVDAWAPLRGMQP CCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCC ARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF CCCCCEEEEECCCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCC >Mature Secondary Structure MKKQDVARTVLASALAVALSACGGGGGGGGIRPSTPAAPPVTSPPPPPPPTSPPPPPVTT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTTPEPAIDAHLALTNARAAQALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPR CCCCCCCCCEEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEECCC TNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLVSARIISDRAPEDDGSGDGNEV CCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCCCCCCCCCCCCC DGPLGLGPVHADLISAGVRIMNNSWGGLFWNDPTVTNQIAQEYRPFILSHDGLVVFASGN CCCCCCCHHHHHHHHHCEEEEECCCCCEEECCCHHHHHHHHHCCCEEEECCCEEEEECCC ESRSQPSDTAALPSQPGPNGTLPAADLERGWLVVGALDTANPTQLASYSNACGVAMRYCL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHH VAPGTSLFIDPDATAGNIRYFYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTA CCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TDLGAAGVDPVFGYGLLDVGKAVLGPARFDWGTVEVDVTTLRSTWANDISGTGGLTKRGT HHCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCCC GALVLSSTANTFTGDTQVLGGTLQTASLQSARVSIANGARLVGAGSIGGRVDNAGTLQVN CEEEEECCCCCCCCCCHHCCCEEECCCCCHHEEEECCCCEEEECCCCCCCCCCCCEEEEC GATASIAGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYAVLQATN CCEEEEECCCEECCCCEEEEECCCCCCCCEEEEEECCHHEECCCCEEECCCEEEEEEECC GLQGTFDTLSSGPAVTFLSATRSYDANTAYVSLQRMDVTAVAASLGAIGTASMDAAIRVE CCCCCHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCCHHHHHHH QAFQQVDAQQFQGNGALSGAFIRAAAALQQSPTAKAAADSLRSLSGRAHADSAAMTFDTI HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHH DLGRRALAAHFDGLSQQPRLLGNWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVT HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEECCCEE GFAFGETRSSSLGDLDGARGRDRQVQAQLYWGTTLGAAYTLGQMGFGNVNRQIERTLQLG EEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHCC EDRSSAFSDYSGSYLSSNLETGYRLGGAHASLTPYMGLDYVRLRSDGFRESGGDGFGLRA CCHHHHHCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEE NASTSSRAQALAGVRSAYHWRGIQLGGYAEWQQALSSDGLTLDASFVGVDAWAPLRGMQP CCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCC ARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF CCCCCEEEEECCCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3011754; 1639760 [H]