| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is visC [C]
Identifier: 21242091
GI number: 21242091
Start: 1542886
End: 1544160
Strand: Direct
Name: visC [C]
Synonym: XAC1338
Alternate gene names: 21242091
Gene position: 1542886-1544160 (Clockwise)
Preceding gene: 21242090
Following gene: 77748578
Centisome position: 29.81
GC content: 66.98
Gene sequence:
>1275_bases ATGCTACGAGCACTACGCATTGCGGTAGTGGGCTACGGAACCGCGGGGCAGGCATTGGCCGTGCTGCTGGGCGCCGATGG TCATCAACTGGAGGTATTCGAGCGCGCAGCTGCGCCCGGGCCGGTGGGCGCCGGTTTTCTGCTGCAACCCAGCGGGCTGC AGGTGCTCTGGAACATGGGCTTGCTGCCGCAGGCGCTGGCGCATGGCGCGCCGGTGCGCCGCCTGTATGGCGACACGCCG TGCGGGCGTGCGGTGATGGACATGCAGTACCGCGATCTGGATACACGCCTGATGGGTGTGGGCATGCAGCGCGGCGCGTT GTTTACGGTGCTGCGCGAGGCCTGGCCGCAGCACGCGCAACTGCATGTGGATACGCAGATCACCGCGATCGATCACGCGG GCGTGCGCGTTCAGGATCAACGCGGGCAATGGCATGGTCCCTTCGATCTGATCATCGCCGCCGATGGCTCGGCCTCCACG TTGCGTGCGCAGGCGCAGGGAACGCAGCTGGATCGCGTGTATCCATGGGGGGCGCTGTGGTGCCTGTTGCCGCGCGAAGA CTGGCCCTTTGTGGACCAATTGCGTCAGCGCTATATCGGCGCACGCAAGATGATCGGCCTGTTGCCGGTGGGCACGCGCC CGGGCGACGACACGCCGCGGCTGAGTTTTTTCTGGAGCCTGCCGTGCAGCGATTTCGTTGCGTGGGAACAGCGCGGCATT GCCGCCTGGCGCGACGAAGTGGCGCAGATGTGGCCAGAGGCGCACGCGCGGCTTGCCACGGTGCAGGTGCATGGCGCATT GGCACGCGCGAGTTATCGCGATGCGGTGGTGTCGCGCTGGCATCGCGGCCGCTTCGTGCTTGCCGGCGATGCCGCGCATG CGATGAGCCCGCAATCGGGGCAGGGCGTGAACATGGCGCTGCTGGACGCATTGGCGATGCGCGATGCCTTGCGCGCGGGC GCCGATCTGGACGATGCCTTGCAGCGCTACCAGCGCGAACGCCAGGCGCATGTGGCGATCTATCACCGCTGGAGCCGCTG GCTGACACCGCTGTTCCAGTCCGAACGTGATCTCTGGGCACAAGGCCGCGACCTGCTGCTGCGTCCGATGGGACGCGTGC CGGGCGGACGTGGGCACATGTTGCGCGTGCTCAGCGGCACCCAGCATGGCTGGTTCGGCAAGCTGGTCTTGGCGCCGGAT TTCGTTGACGCGTTATCGCAGCCGGTTGTGCGTGTGGTGGACGATAAAGCCGAAGCGGCCGCGTCGAGCAGCTAA
Upstream 100 bases:
>100_bases CGAGTAATCTGACTCGATTGTGCGGTTGAAAACCCCGCCACGGCGGGGTTTTTTTTCGCCGGTTGTGCGCGGGCAGCGAT AGCCAAACAGAGCAGGGACG
Downstream 100 bases:
>100_bases TAAAACGATATGCAGCCGTTAGGCGGGCGCAGCCGGTGCCCGCCGCGGCATGCACCACTCGGACCCCTCGGTTTTGAGCG CTCGGTTTGCAACCACCTGA
Product: oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Monooxygenase; Monooxygenase; 2-Polyprenyl-6-Methoxyphenol Hydroxylase; Oxidoreductase Protein; FAD Dependent Oxidoreductase; Glutamate Synthase Small Subunit Protein; FAD-Dependent Oxidoreductase; Salicylate 1-Monooxygenase; Monoxygenase
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MLRALRIAVVGYGTAGQALAVLLGADGHQLEVFERAAAPGPVGAGFLLQPSGLQVLWNMGLLPQALAHGAPVRRLYGDTP CGRAVMDMQYRDLDTRLMGVGMQRGALFTVLREAWPQHAQLHVDTQITAIDHAGVRVQDQRGQWHGPFDLIIAADGSAST LRAQAQGTQLDRVYPWGALWCLLPREDWPFVDQLRQRYIGARKMIGLLPVGTRPGDDTPRLSFFWSLPCSDFVAWEQRGI AAWRDEVAQMWPEAHARLATVQVHGALARASYRDAVVSRWHRGRFVLAGDAAHAMSPQSGQGVNMALLDALAMRDALRAG ADLDDALQRYQRERQAHVAIYHRWSRWLTPLFQSERDLWAQGRDLLLRPMGRVPGGRGHMLRVLSGTQHGWFGKLVLAPD FVDALSQPVVRVVDDKAEAAASSS
Sequences:
>Translated_424_residues MLRALRIAVVGYGTAGQALAVLLGADGHQLEVFERAAAPGPVGAGFLLQPSGLQVLWNMGLLPQALAHGAPVRRLYGDTP CGRAVMDMQYRDLDTRLMGVGMQRGALFTVLREAWPQHAQLHVDTQITAIDHAGVRVQDQRGQWHGPFDLIIAADGSAST LRAQAQGTQLDRVYPWGALWCLLPREDWPFVDQLRQRYIGARKMIGLLPVGTRPGDDTPRLSFFWSLPCSDFVAWEQRGI AAWRDEVAQMWPEAHARLATVQVHGALARASYRDAVVSRWHRGRFVLAGDAAHAMSPQSGQGVNMALLDALAMRDALRAG ADLDDALQRYQRERQAHVAIYHRWSRWLTPLFQSERDLWAQGRDLLLRPMGRVPGGRGHMLRVLSGTQHGWFGKLVLAPD FVDALSQPVVRVVDDKAEAAASSS >Mature_424_residues MLRALRIAVVGYGTAGQALAVLLGADGHQLEVFERAAAPGPVGAGFLLQPSGLQVLWNMGLLPQALAHGAPVRRLYGDTP CGRAVMDMQYRDLDTRLMGVGMQRGALFTVLREAWPQHAQLHVDTQITAIDHAGVRVQDQRGQWHGPFDLIIAADGSAST LRAQAQGTQLDRVYPWGALWCLLPREDWPFVDQLRQRYIGARKMIGLLPVGTRPGDDTPRLSFFWSLPCSDFVAWEQRGI AAWRDEVAQMWPEAHARLATVQVHGALARASYRDAVVSRWHRGRFVLAGDAAHAMSPQSGQGVNMALLDALAMRDALRAG ADLDDALQRYQRERQAHVAIYHRWSRWLTPLFQSERDLWAQGRDLLLRPMGRVPGGRGHMLRVLSGTQHGWFGKLVLAPD FVDALSQPVVRVVDDKAEAAASSS
Specific function: Not Yet Known. [C]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46848; Mature: 46848
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRALRIAVVGYGTAGQALAVLLGADGHQLEVFERAAAPGPVGAGFLLQPSGLQVLWNMG CCCEEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHCCCCCCCCCEEECCCCCHHHHHCC LLPQALAHGAPVRRLYGDTPCGRAVMDMQYRDLDTRLMGVGMQRGALFTVLREAWPQHAQ CHHHHHHCCCCHHHHCCCCCCCCHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCE LHVDTQITAIDHAGVRVQDQRGQWHGPFDLIIAADGSASTLRAQAQGTQLDRVYPWGALW EEECEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCCHHEEEHHCCCCCCEECCCCCEE CLLPREDWPFVDQLRQRYIGARKMIGLLPVGTRPGDDTPRLSFFWSLPCSDFVAWEQRGI EEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHCCH AAWRDEVAQMWPEAHARLATVQVHGALARASYRDAVVSRWHRGRFVLAGDAAHAMSPQSG HHHHHHHHHHCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCC QGVNMALLDALAMRDALRAGADLDDALQRYQRERQAHVAIYHRWSRWLTPLFQSERDLWA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QGRDLLLRPMGRVPGGRGHMLRVLSGTQHGWFGKLVLAPDFVDALSQPVVRVVDDKAEAA CCCHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHH ASSS CCCC >Mature Secondary Structure MLRALRIAVVGYGTAGQALAVLLGADGHQLEVFERAAAPGPVGAGFLLQPSGLQVLWNMG CCCEEEEEEEECCCCCCEEEEEECCCCCEEHHHHHHCCCCCCCCCEEECCCCCHHHHHCC LLPQALAHGAPVRRLYGDTPCGRAVMDMQYRDLDTRLMGVGMQRGALFTVLREAWPQHAQ CHHHHHHCCCCHHHHCCCCCCCCHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCE LHVDTQITAIDHAGVRVQDQRGQWHGPFDLIIAADGSASTLRAQAQGTQLDRVYPWGALW EEECEEEEEEECCCCEEECCCCCCCCCEEEEEECCCCCHHEEEHHCCCCCCEECCCCCEE CLLPREDWPFVDQLRQRYIGARKMIGLLPVGTRPGDDTPRLSFFWSLPCSDFVAWEQRGI EEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHCCH AAWRDEVAQMWPEAHARLATVQVHGALARASYRDAVVSRWHRGRFVLAGDAAHAMSPQSG HHHHHHHHHHCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCC QGVNMALLDALAMRDALRAGADLDDALQRYQRERQAHVAIYHRWSRWLTPLFQSERDLWA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QGRDLLLRPMGRVPGGRGHMLRVLSGTQHGWFGKLVLAPDFVDALSQPVVRVVDDKAEAA CCCHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHH ASSS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA