| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748558
Identifier: 77748558
GI number: 77748558
Start: 1194367
End: 1194786
Strand: Direct
Name: 77748558
Synonym: XAC1035
Alternate gene names: NA
Gene position: 1194367-1194786 (Clockwise)
Preceding gene: 21241799
Following gene: 21241809
Centisome position: 23.08
GC content: 68.33
Gene sequence:
>420_bases ATGTCCACGTCCCTGCGTCATGCGCTTGTGTTCCTGGCCGCGCTGACGGTTGCCGGATGCAAGCAGCAACCGGCCGACCC TGTCGCCACGCAACCCAAACCTGCCGTGAGCGCACCGGCGCCGCCCCCCGGCGGCGACGCGCAAGCCCGCGCGCTGCAGG CGCTCGAAGCCCGCTTGCAGGGCGACAACGCGTACCCGGATCATTGCATCAGCATCATGGCCGAGGACGGCGATGCGCCT GCGCCGGACACGTTCGATTTTGCGGTGCGCGAACGCCATGGCGACGGCTGCCCTGGCGACCCGCAGACCAGCCCGGTACG CGACCGTTTCCGCGTGCAGGCCGATGGCACGCTGCTGTGGTACGACGTGGTGAATGCCGATTTTGTCGACTACGCCGAGC GTGCGCGAAGCCTGCAGTAA
Upstream 100 bases:
>100_bases CGCAAGTGCCGGGCTTTTTAGCTACACCTGCGCGCATGGATCGCGCAGACTAGGCGCATCGCCGGTGACTGCCGGCCCTG TCCTGTCGAGCGGAGCCCTC
Downstream 100 bases:
>100_bases TGCGGCGCGACCATGATTGATTGGCACGCCTGACGATGCTGCGCGTCTCTATCGGCAAGCGCTGTTGATCCATCGCTGCA TAGCCGCGCGTCTGTGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSTSLRHALVFLAALTVAGCKQQPADPVATQPKPAVSAPAPPPGGDAQARALQALEARLQGDNAYPDHCISIMAEDGDAP APDTFDFAVRERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFVDYAERARSLQ
Sequences:
>Translated_139_residues MSTSLRHALVFLAALTVAGCKQQPADPVATQPKPAVSAPAPPPGGDAQARALQALEARLQGDNAYPDHCISIMAEDGDAP APDTFDFAVRERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFVDYAERARSLQ >Mature_138_residues STSLRHALVFLAALTVAGCKQQPADPVATQPKPAVSAPAPPPGGDAQARALQALEARLQGDNAYPDHCISIMAEDGDAPA PDTFDFAVRERHGDGCPGDPQTSPVRDRFRVQADGTLLWYDVVNADFVDYAERARSLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14842; Mature: 14710
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSLRHALVFLAALTVAGCKQQPADPVATQPKPAVSAPAPPPGGDAQARALQALEARLQ CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GDNAYPDHCISIMAEDGDAPAPDTFDFAVRERHGDGCPGDPQTSPVRDRFRVQADGTLLW CCCCCCHHHHEEHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCEEEE YDVVNADFVDYAERARSLQ EECCCCHHHHHHHHHHCCC >Mature Secondary Structure STSLRHALVFLAALTVAGCKQQPADPVATQPKPAVSAPAPPPGGDAQARALQALEARLQ CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GDNAYPDHCISIMAEDGDAPAPDTFDFAVRERHGDGCPGDPQTSPVRDRFRVQADGTLLW CCCCCCHHHHEEHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCEEEE YDVVNADFVDYAERARSLQ EECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA