| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is grxC [H]
Identifier: 21241809
GI number: 21241809
Start: 1206013
End: 1206381
Strand: Direct
Name: grxC [H]
Synonym: XAC1044
Alternate gene names: 21241809
Gene position: 1206013-1206381 (Clockwise)
Preceding gene: 77748558
Following gene: 21241810
Centisome position: 23.3
GC content: 64.77
Gene sequence:
>369_bases GTGGAAATTCCAGTCGCCCGGTACCATGTGTCAGACCTCACACCAACCACGGAGTTTCCCGTGAGCCAAGACCATACCGA TCAGGACGCGGCCTCCGGCCCGCAGATCACCCTGTATTCCTCCGCCATCTGCCCGTATTGCGTGGCGGCCAAGAACTTCC TCAAGAGCAAGGGCAAGACCTGGACCGAGGTGCGGATCGACCTGGACCCGGCCGAGCGCGACAAGATGGTCGCCCTGGCC AAGCGCACCAGCGTGCCGCAGATCTTCGTCGGCGACGTCCATGTGGGTGGCTACGACGACATGATGGCCATGCATCGTGC CGGCAAGCTCGAGCCGCTGCTGGCCGGCAGCGCGGGCGGCCAGGCATGA
Upstream 100 bases:
>100_bases AGCAGGCGCAAGTGGAACTCCCAGGTGGTGCGCGGAGCATGCGGGCAGCCCGGCGCAGAGGCGTGAATCGTCGGTTAACC CACAGTGTTGCGGTGACGAC
Downstream 100 bases:
>100_bases GTGGTTCCGACGAGGGCAGCGCCGACCGCCTGCGCGAGTTCACGCAATTCCGCCAGCGCATGAACCAGCGCATCCTGGCC GAGCCGAACCAGGTGGTGCG
Product: glutaredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MEIPVARYHVSDLTPTTEFPVSQDHTDQDAASGPQITLYSSAICPYCVAAKNFLKSKGKTWTEVRIDLDPAERDKMVALA KRTSVPQIFVGDVHVGGYDDMMAMHRAGKLEPLLAGSAGGQA
Sequences:
>Translated_122_residues MEIPVARYHVSDLTPTTEFPVSQDHTDQDAASGPQITLYSSAICPYCVAAKNFLKSKGKTWTEVRIDLDPAERDKMVALA KRTSVPQIFVGDVHVGGYDDMMAMHRAGKLEPLLAGSAGGQA >Mature_122_residues MEIPVARYHVSDLTPTTEFPVSQDHTDQDAASGPQITLYSSAICPYCVAAKNFLKSKGKTWTEVRIDLDPAERDKMVALA KRTSVPQIFVGDVHVGGYDDMMAMHRAGKLEPLLAGSAGGQA
Specific function: Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins [H]
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790039, Length=80, Percent_Identity=43.75, Blast_Score=79, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011900 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 13192; Mature: 13192
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIPVARYHVSDLTPTTEFPVSQDHTDQDAASGPQITLYSSAICPYCVAAKNFLKSKGKT CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCE WTEVRIDLDPAERDKMVALAKRTSVPQIFVGDVHVGGYDDMMAMHRAGKLEPLLAGSAGG EEEEEEECCCCCCCCEEEHHHHCCCCEEEECCEEECCHHHHHHHHHCCCCCEEEECCCCC QA CC >Mature Secondary Structure MEIPVARYHVSDLTPTTEFPVSQDHTDQDAASGPQITLYSSAICPYCVAAKNFLKSKGKT CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCE WTEVRIDLDPAERDKMVALAKRTSVPQIFVGDVHVGGYDDMMAMHRAGKLEPLLAGSAGG EEEEEEECCCCCCCCEEEHHHHCCCCEEEECCEEECCHHHHHHHHHCCCCCEEEECCCCC QA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]