| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 77748547
Identifier: 77748547
GI number: 77748547
Start: 818406
End: 819266
Strand: Reverse
Name: 77748547
Synonym: XAC0691
Alternate gene names: NA
Gene position: 819266-818406 (Counterclockwise)
Preceding gene: 21241488
Following gene: 21241461
Centisome position: 15.83
GC content: 64.69
Gene sequence:
>861_bases ATGACACACACAGATATCCCGACCCCGCTGGCCGACTGGATCGTGGCGCAAGCCGTGGCCGGCCATCCGCCCGAGCAAGC GCTACAGCCGCTCCTGGATCAGGGCTGGAACGAGCAGGACGCCATCGATGCGGTCGAGGCACTGGTCCGTGCCCACATCC AACAACACGCGCAAGCAAACGGCTTGCCGATGCCGGTGCGCGTGCCCGCGTTGCAACAGGACACCGATGCATCGCTGCTT GCATTGGGCGACCGCGAGGTACGCGTCTTGGTCAGCCTGTTGCTGCCGCGCGTGGTGGTACTCGGCGGTTTTCTTTCCGA CGGTGAATGCGATGCATTGATCGCCTTGGCCCGTCCGCGCCTGGCGCGTTCGCGCACCGTGGACAATGCGAACGGAGAGC ACATGGTGCATGCAGCACGCACCAGCGACAGCATGTGCCTGCGCGTGGGCCAGGATGCGCTGTGCCAACGTATCGAAGCG CGCATCGCGCGCCTGTTCGACTGGCCAGTCGATCACGGCGAAGGGTTGCAGGTACTGCGCTACGCGACCGGTGCCGAATA CCGGCCGCACTACGATTACTTCGACCCGGACGCAGCCGGCACCCCGATATTGTTGCAGGCCGGCGGGCAACGCGTCGCCT CGCTGGTGATGTACCTCAATACGCCAGAACGCGGCGGCGCGACGCGTTTTCCTGACGCGCATCTGGATGTCGCTGCGGTC AAGGGCAATGCAGTGTTTTTCAGCTACGACCGCCCGCATCCGATGACGCGCAGCCTGCATGCCGGCGCGCCGGTATTGGC CGGCGAAAAGTGGGTGGCCACAAAGTGGTTACGCGAACGCGCAGTGCGCATGCCCACATAA
Upstream 100 bases:
>100_bases TCAAGATCCCCGTCACTTTTATAGAGGGCATCTGTTTCATTTGTCTTACCGCGACACAATTGACATACGAATGCCACACG TCGACATACACTGTAGAGCG
Downstream 100 bases:
>100_bases GCACGGCAACAACGCGCCGGCGGGATCGGCCACGTCCACCGCCAGCGAGGAACGACGCGGCGCCTGCTGCGCTGTTGGCT GTTGGCTGTTGGCTGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTHTDIPTPLADWIVAQAVAGHPPEQALQPLLDQGWNEQDAIDAVEALVRAHIQQHAQANGLPMPVRVPALQQDTDASLL ALGDREVRVLVSLLLPRVVVLGGFLSDGECDALIALARPRLARSRTVDNANGEHMVHAARTSDSMCLRVGQDALCQRIEA RIARLFDWPVDHGEGLQVLRYATGAEYRPHYDYFDPDAAGTPILLQAGGQRVASLVMYLNTPERGGATRFPDAHLDVAAV KGNAVFFSYDRPHPMTRSLHAGAPVLAGEKWVATKWLRERAVRMPT
Sequences:
>Translated_286_residues MTHTDIPTPLADWIVAQAVAGHPPEQALQPLLDQGWNEQDAIDAVEALVRAHIQQHAQANGLPMPVRVPALQQDTDASLL ALGDREVRVLVSLLLPRVVVLGGFLSDGECDALIALARPRLARSRTVDNANGEHMVHAARTSDSMCLRVGQDALCQRIEA RIARLFDWPVDHGEGLQVLRYATGAEYRPHYDYFDPDAAGTPILLQAGGQRVASLVMYLNTPERGGATRFPDAHLDVAAV KGNAVFFSYDRPHPMTRSLHAGAPVLAGEKWVATKWLRERAVRMPT >Mature_285_residues THTDIPTPLADWIVAQAVAGHPPEQALQPLLDQGWNEQDAIDAVEALVRAHIQQHAQANGLPMPVRVPALQQDTDASLLA LGDREVRVLVSLLLPRVVVLGGFLSDGECDALIALARPRLARSRTVDNANGEHMVHAARTSDSMCLRVGQDALCQRIEAR IARLFDWPVDHGEGLQVLRYATGAEYRPHYDYFDPDAAGTPILLQAGGQRVASLVMYLNTPERGGATRFPDAHLDVAAVK GNAVFFSYDRPHPMTRSLHAGAPVLAGEKWVATKWLRERAVRMPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI63252886, Length=190, Percent_Identity=35.7894736842105, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI4758868, Length=189, Percent_Identity=35.4497354497354, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI217272863, Length=189, Percent_Identity=35.4497354497354, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI217272849, Length=190, Percent_Identity=35.2631578947368, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI63252888, Length=190, Percent_Identity=35.2631578947368, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI33589818, Length=244, Percent_Identity=33.1967213114754, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI63252893, Length=193, Percent_Identity=34.1968911917098, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI63252891, Length=193, Percent_Identity=34.1968911917098, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI217272861, Length=193, Percent_Identity=34.1968911917098, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI217272851, Length=190, Percent_Identity=32.6315789473684, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17552840, Length=199, Percent_Identity=29.6482412060301, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17541712, Length=198, Percent_Identity=32.3232323232323, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI193209070, Length=159, Percent_Identity=27.6729559748428, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193209068, Length=153, Percent_Identity=28.1045751633987, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24651477, Length=254, Percent_Identity=29.5275590551181, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI281362877, Length=195, Percent_Identity=32.3076923076923, Blast_Score=104, Evalue=8e-23, Organism=Drosophila melanogaster, GI24651407, Length=188, Percent_Identity=31.3829787234043, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24651418, Length=195, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI221460681, Length=198, Percent_Identity=32.3232323232323, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI116008128, Length=217, Percent_Identity=29.9539170506912, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI116008432, Length=217, Percent_Identity=29.9539170506912, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21358233, Length=254, Percent_Identity=28.3464566929134, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24651424, Length=184, Percent_Identity=28.2608695652174, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI24651420, Length=209, Percent_Identity=30.622009569378, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI221512818, Length=124, Percent_Identity=35.4838709677419, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI116008130, Length=188, Percent_Identity=27.1276595744681, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI116008537, Length=188, Percent_Identity=27.1276595744681, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550650, Length=123, Percent_Identity=30.8943089430894, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI24651430, Length=188, Percent_Identity=27.6595744680851, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116008434, Length=191, Percent_Identity=27.7486910994764, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281361323, Length=187, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI78706702, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24651416, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI21358309, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31283; Mature: 31152
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTDIPTPLADWIVAQAVAGHPPEQALQPLLDQGWNEQDAIDAVEALVRAHIQQHAQAN CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC GLPMPVRVPALQQDTDASLLALGDREVRVLVSLLLPRVVVLGGFLSDGECDALIALARPR CCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCH LARSRTVDNANGEHMVHAARTSDSMCLRVGQDALCQRIEARIARLFDWPVDHGEGLQVLR HHHHCCCCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH YATGAEYRPHYDYFDPDAAGTPILLQAGGQRVASLVMYLNTPERGGATRFPDAHLDVAAV HHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE KGNAVFFSYDRPHPMTRSLHAGAPVLAGEKWVATKWLRERAVRMPT ECCEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure THTDIPTPLADWIVAQAVAGHPPEQALQPLLDQGWNEQDAIDAVEALVRAHIQQHAQAN CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC GLPMPVRVPALQQDTDASLLALGDREVRVLVSLLLPRVVVLGGFLSDGECDALIALARPR CCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCH LARSRTVDNANGEHMVHAARTSDSMCLRVGQDALCQRIEARIARLFDWPVDHGEGLQVLR HHHHCCCCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH YATGAEYRPHYDYFDPDAAGTPILLQAGGQRVASLVMYLNTPERGGATRFPDAHLDVAAV HHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE KGNAVFFSYDRPHPMTRSLHAGAPVLAGEKWVATKWLRERAVRMPT ECCEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA