| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fecA [H]
Identifier: 21241461
GI number: 21241461
Start: 815943
End: 817988
Strand: Reverse
Name: fecA [H]
Synonym: XAC0690
Alternate gene names: 21241461
Gene position: 817988-815943 (Counterclockwise)
Preceding gene: 77748547
Following gene: 21241458
Centisome position: 15.8
GC content: 63.83
Gene sequence:
>2046_bases ATGAAGATCCGTCCCCTCGTGGCGACTGTCGCCGCTCTGCTCTTTGCTGCCGACGCACGCGCGCAGTCCTCCGATTCGGC ACTGACGCTCGGCAAGGTCGACGTCCATCAGCATCACGAAGGCCAGCTCAGTGCGCATCAGGTGCTGACGTCGGTAGATG TCCTGGGCGCCGACCAGATCGAGGACAAGAACGTGTCCTACAGCTGGGAATTGCTCGGGCAGATGCCCGGCATGCAGTTG ACCGAAACCCGTCAGGGCGCCGAATCGGGCAAAGTCAGCTTCCGCGCCTTCAACGGCGAGGGCTATCTCAATGCAATCAA GACCCTGATCGACGGCATTCCCAGCAACGTCAACAGCGGCAACCAGCGTTTCATCGACATGCTGTTTCCGCTGGAAATCA GCTACATCGAGGTAGTGCGCGGCACCAACGATCCGCGCTATGGGCTGCACAACATCGGCGGCAACATCAACTTCGGCACC CGCCAGGGCGGCAGCTACACCGATGCCCGCGTTGCCTACGGCAGTTACGCCAGCCGCGATGCGCAGATCGCGATAGGGCG CGAGCACGACGGATTCGCGCAGAACTACTTCATCGGCGCACAGGCATCGGATGGCTATCGTGCGCACGATCGTTCCAGCA AGTATGTGTTGGGCGGCAAGTGGTTCTACGGCAATCTCGACGACGGCATGCGCATCGGCCTGACGGCACGCGCGTACCGC AACCAGGCCGACGAGCCGGGCTTCATGACCGCAGCAGAGCTGCAGACCGACCGTCGCAGCTCGGACCGCCGCAACCGCAA TGATGGCGACGACCGCGACATGCAGCAGGCCGGCGTGCACCTGGACCTGAAACTGACCGACGCCCTGTTCCTGGGCAGCA AGCTTTACTACAACCGCTACGAGGACGACCGCCGGGTGACCTTCAGCGACCTGCCCATCGGCAATGCGCCGCGTCAGCGT CGGCGCTGGGACGAAACGCAGGTAGGCATGCTCAACACCCTGACCTGGCGCGCCAACGACTTGCTGACCCTGGAAGGCGG CATCAACTACGAACATCAAGACAATGCGTACCGACGCGAGCGCTTCAACTATGCCGAGCCCACCGACTTCACCGCAGCGC CAGCGCGCATCCAGAACGACGACCGCTATACGTTCGACAATTGGGGCGCCTACGTGCAGGCCATCTATCAGCCGGTCGAG GCACTGAAGCTGGTGCCGGCCTATCGCGTGGACCGCTTCGACGGCGACACACTGCTGCCGGGCGCGGTGCGCGCACCGCT GCAGCGTTACGGCAGCATCGGGCAGCCCAAACTCAGCGTGATCTACGCCCTGACCCCCACCACCAACGTGTATGCCAACT GGGGCCGTACCTTCCAGGTGTTGACCGGCTCCACCGCCCCGGCCTATCTCACCCCGGGGCAAGCCGGCATCCGCCCTTCC ACCAACACCGGCGTCGAGCTTGGCATGAAGTTCAGCCCATTTGCAGGCAGCCAGGCGCGCATCGCCGTCTGGCAACAGGA TGCGGAAAACGAGGTGTCGAACATGCCGGCCACCGGCACCACCGTCACCTTGGGCAAGACGCGTCGCCGCGGCGTGGATG CGCAGATCAGCGCACAGCTGGGCGATCGATGGACGCTCTGGGCATCGCATGCCTACCAGGAAGCCAGGATCACGCGCGAC GACCGTGCCGCCGCGCTTTCGCTGCAAGGCAATGAAGTCATCGCCACGCCCCGCTACATCAGCAACATCGGCGTGGACTA CCGCGCGACCGAGGCGTTGCAACTGGGTCTGCAGGGACGCGCCCAGGGCGACTACTACCTCGAGGAGCGCAACGTGGCAG GCAAGTACGGCGGCTTTGCGACGCTCGACCTCACGGTGCGCTATACGATCAACCCGAACTGGAGCGTGGACGTGCAGGTC CGCAATGCCACCGGTCGCGAGTATGCCTACGTGTGGTACGACAGCTTCTTCTGGGCACAGGCGCAGCCCATGTTCTCGCC AGCGGCCGGACGGCAGCTGTATCTCGGGCTGAGAATGAAGCTGTAA
Upstream 100 bases:
>100_bases AGCCGCCATAAAGCACGACACAAATTGAATTTGTCGAAGTATGTTATAACATGTCATTTCTGACACATACTTCCACTGGC CCGCAGGTGTTGCCCGCTTC
Downstream 100 bases:
>100_bases CGGCAGCGGTGGCGAGGTGCGAATCGCTGGTCCGCAGCGTAGCGGCTGCACAAACCGTCATCGCCAAGCCGGTAACTGGC GCCCCGCCGCGGCCTCGGCA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MKIRPLVATVAALLFAADARAQSSDSALTLGKVDVHQHHEGQLSAHQVLTSVDVLGADQIEDKNVSYSWELLGQMPGMQL TETRQGAESGKVSFRAFNGEGYLNAIKTLIDGIPSNVNSGNQRFIDMLFPLEISYIEVVRGTNDPRYGLHNIGGNINFGT RQGGSYTDARVAYGSYASRDAQIAIGREHDGFAQNYFIGAQASDGYRAHDRSSKYVLGGKWFYGNLDDGMRIGLTARAYR NQADEPGFMTAAELQTDRRSSDRRNRNDGDDRDMQQAGVHLDLKLTDALFLGSKLYYNRYEDDRRVTFSDLPIGNAPRQR RRWDETQVGMLNTLTWRANDLLTLEGGINYEHQDNAYRRERFNYAEPTDFTAAPARIQNDDRYTFDNWGAYVQAIYQPVE ALKLVPAYRVDRFDGDTLLPGAVRAPLQRYGSIGQPKLSVIYALTPTTNVYANWGRTFQVLTGSTAPAYLTPGQAGIRPS TNTGVELGMKFSPFAGSQARIAVWQQDAENEVSNMPATGTTVTLGKTRRRGVDAQISAQLGDRWTLWASHAYQEARITRD DRAAALSLQGNEVIATPRYISNIGVDYRATEALQLGLQGRAQGDYYLEERNVAGKYGGFATLDLTVRYTINPNWSVDVQV RNATGREYAYVWYDSFFWAQAQPMFSPAAGRQLYLGLRMKL
Sequences:
>Translated_681_residues MKIRPLVATVAALLFAADARAQSSDSALTLGKVDVHQHHEGQLSAHQVLTSVDVLGADQIEDKNVSYSWELLGQMPGMQL TETRQGAESGKVSFRAFNGEGYLNAIKTLIDGIPSNVNSGNQRFIDMLFPLEISYIEVVRGTNDPRYGLHNIGGNINFGT RQGGSYTDARVAYGSYASRDAQIAIGREHDGFAQNYFIGAQASDGYRAHDRSSKYVLGGKWFYGNLDDGMRIGLTARAYR NQADEPGFMTAAELQTDRRSSDRRNRNDGDDRDMQQAGVHLDLKLTDALFLGSKLYYNRYEDDRRVTFSDLPIGNAPRQR RRWDETQVGMLNTLTWRANDLLTLEGGINYEHQDNAYRRERFNYAEPTDFTAAPARIQNDDRYTFDNWGAYVQAIYQPVE ALKLVPAYRVDRFDGDTLLPGAVRAPLQRYGSIGQPKLSVIYALTPTTNVYANWGRTFQVLTGSTAPAYLTPGQAGIRPS TNTGVELGMKFSPFAGSQARIAVWQQDAENEVSNMPATGTTVTLGKTRRRGVDAQISAQLGDRWTLWASHAYQEARITRD DRAAALSLQGNEVIATPRYISNIGVDYRATEALQLGLQGRAQGDYYLEERNVAGKYGGFATLDLTVRYTINPNWSVDVQV RNATGREYAYVWYDSFFWAQAQPMFSPAAGRQLYLGLRMKL >Mature_681_residues MKIRPLVATVAALLFAADARAQSSDSALTLGKVDVHQHHEGQLSAHQVLTSVDVLGADQIEDKNVSYSWELLGQMPGMQL TETRQGAESGKVSFRAFNGEGYLNAIKTLIDGIPSNVNSGNQRFIDMLFPLEISYIEVVRGTNDPRYGLHNIGGNINFGT RQGGSYTDARVAYGSYASRDAQIAIGREHDGFAQNYFIGAQASDGYRAHDRSSKYVLGGKWFYGNLDDGMRIGLTARAYR NQADEPGFMTAAELQTDRRSSDRRNRNDGDDRDMQQAGVHLDLKLTDALFLGSKLYYNRYEDDRRVTFSDLPIGNAPRQR RRWDETQVGMLNTLTWRANDLLTLEGGINYEHQDNAYRRERFNYAEPTDFTAAPARIQNDDRYTFDNWGAYVQAIYQPVE ALKLVPAYRVDRFDGDTLLPGAVRAPLQRYGSIGQPKLSVIYALTPTTNVYANWGRTFQVLTGSTAPAYLTPGQAGIRPS TNTGVELGMKFSPFAGSQARIAVWQQDAENEVSNMPATGTTVTLGKTRRRGVDAQISAQLGDRWTLWASHAYQEARITRD DRAAALSLQGNEVIATPRYISNIGVDYRATEALQLGLQGRAQGDYYLEERNVAGKYGGFATLDLTVRYTINPNWSVDVQV RNATGREYAYVWYDSFFWAQAQPMFSPAAGRQLYLGLRMKL
Specific function: Probable receptor, tonB-dependent [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787723, Length=659, Percent_Identity=24.2792109256449, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 75969; Mature: 75969
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRPLVATVAALLFAADARAQSSDSALTLGKVDVHQHHEGQLSAHQVLTSVDVLGADQI CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC EDKNVSYSWELLGQMPGMQLTETRQGAESGKVSFRAFNGEGYLNAIKTLIDGIPSNVNSG CCCCCCEEEHHHHCCCCCEEHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCC NQRFIDMLFPLEISYIEVVRGTNDPRYGLHNIGGNINFGTRQGGSYTDARVAYGSYASRD CCEEEEEECCCEEEEEEEEECCCCCCCCHHHCCCCEECCCCCCCCCCCCEEEECCCCCCC AQIAIGREHDGFAQNYFIGAQASDGYRAHDRSSKYVLGGKWFYGNLDDGMRIGLTARAYR CEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECEEEECCCCCCCEEEEEEHHHH NQADEPGFMTAAELQTDRRSSDRRNRNDGDDRDMQQAGVHLDLKLTDALFLGSKLYYNRY CCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEECHHHHCCHHEECCC EDDRRVTFSDLPIGNAPRQRRRWDETQVGMLNTLTWRANDLLTLEGGINYEHQDNAYRRE CCCCEEEEECCCCCCCCHHHHCCCCHHCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHH RFNYAEPTDFTAAPARIQNDDRYTFDNWGAYVQAIYQPVEALKLVPAYRVDRFDGDTLLP HCCCCCCCCCCCCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECC GAVRAPLQRYGSIGQPKLSVIYALTPTTNVYANWGRTFQVLTGSTAPAYLTPGQAGIRPS HHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCEECCCCCCCCCC TNTGVELGMKFSPFAGSQARIAVWQQDAENEVSNMPATGTTVTLGKTRRRGVDAQISAQL CCCCEEECEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCEEEECCHHHCCCCCEEEECC GDRWTLWASHAYQEARITRDDRAAALSLQGNEVIATPRYISNIGVDYRATEALQLGLQGR CCEEEEEEHHCHHHHHCCCCCCEEEEEECCCEEEECCHHHHHCCCCCEECHHHHCCCCCC AQGDYYLEERNVAGKYGGFATLDLTVRYTINPNWSVDVQVRNATGREYAYVWYDSFFWAQ CCCCEEEECCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECEEEEC AQPMFSPAAGRQLYLGLRMKL CCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKIRPLVATVAALLFAADARAQSSDSALTLGKVDVHQHHEGQLSAHQVLTSVDVLGADQI CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC EDKNVSYSWELLGQMPGMQLTETRQGAESGKVSFRAFNGEGYLNAIKTLIDGIPSNVNSG CCCCCCEEEHHHHCCCCCEEHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCC NQRFIDMLFPLEISYIEVVRGTNDPRYGLHNIGGNINFGTRQGGSYTDARVAYGSYASRD CCEEEEEECCCEEEEEEEEECCCCCCCCHHHCCCCEECCCCCCCCCCCCEEEECCCCCCC AQIAIGREHDGFAQNYFIGAQASDGYRAHDRSSKYVLGGKWFYGNLDDGMRIGLTARAYR CEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECEEEECCCCCCCEEEEEEHHHH NQADEPGFMTAAELQTDRRSSDRRNRNDGDDRDMQQAGVHLDLKLTDALFLGSKLYYNRY CCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEEEECHHHHCCHHEECCC EDDRRVTFSDLPIGNAPRQRRRWDETQVGMLNTLTWRANDLLTLEGGINYEHQDNAYRRE CCCCEEEEECCCCCCCCHHHHCCCCHHCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHH RFNYAEPTDFTAAPARIQNDDRYTFDNWGAYVQAIYQPVEALKLVPAYRVDRFDGDTLLP HCCCCCCCCCCCCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECC GAVRAPLQRYGSIGQPKLSVIYALTPTTNVYANWGRTFQVLTGSTAPAYLTPGQAGIRPS HHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCCCEECCCCCCCCCC TNTGVELGMKFSPFAGSQARIAVWQQDAENEVSNMPATGTTVTLGKTRRRGVDAQISAQL CCCCEEECEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCEEEECCHHHCCCCCEEEECC GDRWTLWASHAYQEARITRDDRAAALSLQGNEVIATPRYISNIGVDYRATEALQLGLQGR CCEEEEEEHHCHHHHHCCCCCCEEEEEECCCEEEECCHHHHHCCCCCEECHHHHCCCCCC AQGDYYLEERNVAGKYGGFATLDLTVRYTINPNWSVDVQVRNATGREYAYVWYDSFFWAQ CCCCEEEECCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEECEEEEC AQPMFSPAAGRQLYLGLRMKL CCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]