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The map label for this gene is torR [C]

Identifier: 77748530

GI number: 77748530

Start: 582341

End: 584173

Strand: Reverse

Name: torR [C]

Synonym: XAC0495

Alternate gene names: 77748530

Gene position: 584173-582341 (Counterclockwise)

Preceding gene: 21241267

Following gene: 21241265

Centisome position: 11.29

GC content: 69.23

Gene sequence:

>1833_bases
GTGAGCGCGGCGATCATTCCTGCGCCTGCCACTGCAGCGGCGGCCAGCCCGGCCGCGGCCGTGGCGACGCCGCGCGCGGT
GGCGGCCAGCAGCAGCGCACGTGTTGCCGCAGCAACGGCGCCCACGGCGTCACCCACATCGGCAGCGCCCGCCGCGCCGC
ACGATGGCGAGGACAATGTCGCCGCCGATGCGCCGTACCGCGTCCTCATCGTCGAAGACGACCGCTCGCAGGCCTTGTTC
GCGCAGAGCGTGCTGCACGGCGCCGGGATGCATGCGCAGGTCGAGATGACCGCCGCCAGCGTGCCGCAGGCGATCCAGGA
CTATCACCCGGATCTGATCCTGATGGATCTGCACATGCCCGAGCTGGACGGCATCCGCCTGACCACGCTGATCCGCCAGC
AGCCCGGTCAGCAGTTGCTGCCGATCGTGTTCCTGACCGGCGACCCGGACCCGGAGCGCCAGTTCGAAGTGCTCGACAGC
GGCGCCGACGACTTCCTCACCAAGCCGATCCGCCCGCGCCACCTGATCGCTGCGGTGTCCAACCGCATCCGCCGCGCACG
CCAACAGGCGCTGCAGCAAGCCGGCGAACAGGTCAGCGTGCGCAGCAATCCGGAAACCGGCCTGCCCACCCGCGGCCACG
TGATGGACCTGCTCGCCGACGCGCTGGAGCGCAAGCAGTCCGGCGGCCTGTTCTTCATCGAGATCGCCAGCGCGCTCGGC
CTGCGCGAGCGTTACGGCTATGCCGCCTACGAGCGCCTGATGACCCAGGCCGGGCACCGCCTGGCCAGCGCCGCCCAGCC
CTACCCGCTGGCGCGCCTGAACGACAACAGCTTCCTGCTGCTGGCCGTCGACATGCCCGAAGCCAGCCTGGAACAGCAGG
CGCTGGAGATCCGCCAGCGGCTGTCCGCCAACGCCTTCCCGGTGCGCGAAGAAGAATCCGTGCATGTGCGCTGCGCCATC
GGCGTCGCACCGCTGGGCCTGGGCTTCGACGACACCGGCAGCGCGCTGGAAGCGGTCGAACGCACCGCGCTGCAGGCACG
CCTGCGCAGCGACGGCGTGCAGACCTATCTGGCGCCCAGCCAGGCCGAACAGCAGGAACAACTGCGGCTGGTCGAAGGTC
AACTGGAACTGGCCTATCAGCCGATCGTGGCCGTGGCCGGCGGCGACACCGCGCAGTACCAGGTGCTGCTGCGGCTGCGC
CAGGCCGATGGTACCTTGCTCTCGGCAGGCCAGGTCATTCCTGCCGCAGAAGCCGCCGGGCGCATCGCCGATCTGGACCA
GCAGGTCATGGACCACGCGCTGGGCCTGCTGCACCTGTACCAGCACGCCAGCCCGCCGCTGCGCCTGTTCGTCTCGCAAT
CGCCGCGCACGCTCGCCCGCGATGCCTTCGCCGACTGGCTGCTCAAGGCGCTGGTCGAGCGTGGCGTGGCCGGCCAGTCG
CTGATCGTGGATCTGCGCCTGGACGATGCATTGATCCATGCCGTCACCGTGCAGCAGTTCTGCGCCAAGTTGATGCCGGC
CGGCGTGCAGTTCTGCCTCAGCCAGTTCGAACCCGGCGATGAAGCCAACGCACTGCTGGCCCAGTTGCCGCTGAGCTTCG
TACGCATGGCCAACCGCTTCGCCGATGCGCACGGCAACGCGGCGGTGCGCGACGAACTGCGCGGCGTGATCGACATCGCC
CACCAGCGCGGCCTGCTGATCATCGGCCAACGCATCGAAGATCCGCAGGCAGCGGCTGCGATGTGGATGAGCGGCGTGGA
TTTCATCCAGGGCAACCTGGTGCAGACCGTCGGCAAGGAACTGGACTTCGACTTCACAAGCGCGGTGCTCTGA

Upstream 100 bases:

>100_bases
CGCCACGCGTAATCGTCCACTTCGCGCCGAGACCCCGCCGGCCGACCACTGGCGTCGCTGGGCCGATGAGGTTGCGTCGC
CGGCCGACACCGCTGTGCCG

Downstream 100 bases:

>100_bases
GTGAGAGAGCGGGCAGCAGGTCTTCGCGCCTGGAGCATCTTGGCAGTGCTGGCCGCGCTGGCAGCCGCACTCGGCGCAGG
CCTGCAGTGGTCTTCGCTGC

Product: two-component system regulatory protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MSAAIIPAPATAAAASPAAAVATPRAVAASSSARVAAATAPTASPTSAAPAAPHDGEDNVAADAPYRVLIVEDDRSQALF
AQSVLHGAGMHAQVEMTAASVPQAIQDYHPDLILMDLHMPELDGIRLTTLIRQQPGQQLLPIVFLTGDPDPERQFEVLDS
GADDFLTKPIRPRHLIAAVSNRIRRARQQALQQAGEQVSVRSNPETGLPTRGHVMDLLADALERKQSGGLFFIEIASALG
LRERYGYAAYERLMTQAGHRLASAAQPYPLARLNDNSFLLLAVDMPEASLEQQALEIRQRLSANAFPVREEESVHVRCAI
GVAPLGLGFDDTGSALEAVERTALQARLRSDGVQTYLAPSQAEQQEQLRLVEGQLELAYQPIVAVAGGDTAQYQVLLRLR
QADGTLLSAGQVIPAAEAAGRIADLDQQVMDHALGLLHLYQHASPPLRLFVSQSPRTLARDAFADWLLKALVERGVAGQS
LIVDLRLDDALIHAVTVQQFCAKLMPAGVQFCLSQFEPGDEANALLAQLPLSFVRMANRFADAHGNAAVRDELRGVIDIA
HQRGLLIIGQRIEDPQAAAAMWMSGVDFIQGNLVQTVGKELDFDFTSAVL

Sequences:

>Translated_610_residues
MSAAIIPAPATAAAASPAAAVATPRAVAASSSARVAAATAPTASPTSAAPAAPHDGEDNVAADAPYRVLIVEDDRSQALF
AQSVLHGAGMHAQVEMTAASVPQAIQDYHPDLILMDLHMPELDGIRLTTLIRQQPGQQLLPIVFLTGDPDPERQFEVLDS
GADDFLTKPIRPRHLIAAVSNRIRRARQQALQQAGEQVSVRSNPETGLPTRGHVMDLLADALERKQSGGLFFIEIASALG
LRERYGYAAYERLMTQAGHRLASAAQPYPLARLNDNSFLLLAVDMPEASLEQQALEIRQRLSANAFPVREEESVHVRCAI
GVAPLGLGFDDTGSALEAVERTALQARLRSDGVQTYLAPSQAEQQEQLRLVEGQLELAYQPIVAVAGGDTAQYQVLLRLR
QADGTLLSAGQVIPAAEAAGRIADLDQQVMDHALGLLHLYQHASPPLRLFVSQSPRTLARDAFADWLLKALVERGVAGQS
LIVDLRLDDALIHAVTVQQFCAKLMPAGVQFCLSQFEPGDEANALLAQLPLSFVRMANRFADAHGNAAVRDELRGVIDIA
HQRGLLIIGQRIEDPQAAAAMWMSGVDFIQGNLVQTVGKELDFDFTSAVL
>Mature_609_residues
SAAIIPAPATAAAASPAAAVATPRAVAASSSARVAAATAPTASPTSAAPAAPHDGEDNVAADAPYRVLIVEDDRSQALFA
QSVLHGAGMHAQVEMTAASVPQAIQDYHPDLILMDLHMPELDGIRLTTLIRQQPGQQLLPIVFLTGDPDPERQFEVLDSG
ADDFLTKPIRPRHLIAAVSNRIRRARQQALQQAGEQVSVRSNPETGLPTRGHVMDLLADALERKQSGGLFFIEIASALGL
RERYGYAAYERLMTQAGHRLASAAQPYPLARLNDNSFLLLAVDMPEASLEQQALEIRQRLSANAFPVREEESVHVRCAIG
VAPLGLGFDDTGSALEAVERTALQARLRSDGVQTYLAPSQAEQQEQLRLVEGQLELAYQPIVAVAGGDTAQYQVLLRLRQ
ADGTLLSAGQVIPAAEAAGRIADLDQQVMDHALGLLHLYQHASPPLRLFVSQSPRTLARDAFADWLLKALVERGVAGQSL
IVDLRLDDALIHAVTVQQFCAKLMPAGVQFCLSQFEPGDEANALLAQLPLSFVRMANRFADAHGNAAVRDELRGVIDIAH
QRGLLIIGQRIEDPQAAAAMWMSGVDFIQGNLVQTVGKELDFDFTSAVL

Specific function: Member Of The Two-Component Regulatory System Tors/Torr Involved In The Anaerobic Utilization Of Trimethylamine-N-Oxide (Tmao). Phosphorylated Torr Activates The Transcription Of The Torcad Operon By Binding To Four Decameric Boxes Located In The Torcad P

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 response regulatory domains [H]

Homologues:

Organism=Escherichia coli, GI1787229, Length=127, Percent_Identity=33.0708661417323, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787541, Length=422, Percent_Identity=22.2748815165877, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786599, Length=139, Percent_Identity=29.4964028776978, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI48994928, Length=178, Percent_Identity=26.4044943820225, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR011006
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 65467; Mature: 65336

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAIIPAPATAAAASPAAAVATPRAVAASSSARVAAATAPTASPTSAAPAAPHDGEDNV
CCCCCCCCCCHHHCCCCCHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
AADAPYRVLIVEDDRSQALFAQSVLHGAGMHAQVEMTAASVPQAIQDYHPDLILMDLHMP
CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCC
ELDGIRLTTLIRQQPGQQLLPIVFLTGDPDPERQFEVLDSGADDFLTKPIRPRHLIAAVS
CCCCEEHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHH
NRIRRARQQALQQAGEQVSVRSNPETGLPTRGHVMDLLADALERKQSGGLFFIEIASALG
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHH
LRERYGYAAYERLMTQAGHRLASAAQPYPLARLNDNSFLLLAVDMPEASLEQQALEIRQR
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHH
LSANAFPVREEESVHVRCAIGVAPLGLGFDDTGSALEAVERTALQARLRSDGVQTYLAPS
HCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC
QAEQQEQLRLVEGQLELAYQPIVAVAGGDTAQYQVLLRLRQADGTLLSAGQVIPAAEAAG
HHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHCC
RIADLDQQVMDHALGLLHLYQHASPPLRLFVSQSPRTLARDAFADWLLKALVERGVAGQS
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCE
LIVDLRLDDALIHAVTVQQFCAKLMPAGVQFCLSQFEPGDEANALLAQLPLSFVRMANRF
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ADAHGNAAVRDELRGVIDIAHQRGLLIIGQRIEDPQAAAAMWMSGVDFIQGNLVQTVGKE
HHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
LDFDFTSAVL
CCCCHHHHCC
>Mature Secondary Structure 
SAAIIPAPATAAAASPAAAVATPRAVAASSSARVAAATAPTASPTSAAPAAPHDGEDNV
CCCCCCCCCHHHCCCCCHHHCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
AADAPYRVLIVEDDRSQALFAQSVLHGAGMHAQVEMTAASVPQAIQDYHPDLILMDLHMP
CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCC
ELDGIRLTTLIRQQPGQQLLPIVFLTGDPDPERQFEVLDSGADDFLTKPIRPRHLIAAVS
CCCCEEHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHH
NRIRRARQQALQQAGEQVSVRSNPETGLPTRGHVMDLLADALERKQSGGLFFIEIASALG
HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHH
LRERYGYAAYERLMTQAGHRLASAAQPYPLARLNDNSFLLLAVDMPEASLEQQALEIRQR
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHH
LSANAFPVREEESVHVRCAIGVAPLGLGFDDTGSALEAVERTALQARLRSDGVQTYLAPS
HCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC
QAEQQEQLRLVEGQLELAYQPIVAVAGGDTAQYQVLLRLRQADGTLLSAGQVIPAAEAAG
HHHHHHHHHHHHHHHHEEECCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHCC
RIADLDQQVMDHALGLLHLYQHASPPLRLFVSQSPRTLARDAFADWLLKALVERGVAGQS
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCE
LIVDLRLDDALIHAVTVQQFCAKLMPAGVQFCLSQFEPGDEANALLAQLPLSFVRMANRF
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ADAHGNAAVRDELRGVIDIAHQRGLLIIGQRIEDPQAAAAMWMSGVDFIQGNLVQTVGKE
HHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
LDFDFTSAVL
CCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763384 [H]