| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748515
Identifier: 77748515
GI number: 77748515
Start: 220012
End: 221019
Strand: Reverse
Name: 77748515
Synonym: XAC0178
Alternate gene names: NA
Gene position: 221019-220012 (Counterclockwise)
Preceding gene: 21240953
Following gene: 21240951
Centisome position: 4.27
GC content: 69.05
Gene sequence:
>1008_bases ATGGCCCAGTGGTATTTCCATAATCCCGGACAGGCCGACCGTCTCGGCCCGCTCGACGATGCCAGCGCCCGCGCGCATGC GCAGCGTCATCCCGATGCGCTGGCCTGGCGCGACGGGCTCGATGGCTGGACGCCGGCCCGTCAGTTGGCCGAACTGCAGG GCGGCCTTAGCGCACCACCGCCGTTGAGCGGCATCAGCGGGCGCGCGGACGAGATCGACTACCGCATCGTCGGCAACGAC ATGCAGTTTGTCGAAGTCGAGCTGGACCCAGGCGAAAGCGCCATCGCCGAGGCCGGTGCGCTGATGTACAAGGACGCGGC GGTGCAGATGGACACCGTGTTCGGCGACGGCTCGCATGCCGGTCAAAGTGGCGGCGGGCTGATGGGCAAGCTGCTGTCGG CCGGCAAACGCGTGGTCACCGGCGAAAGCATGTTCACCACCGTGTTCACCCACGCCGGCAGCGGCAAGGCCAAGGTCGCC TTCGCCGCGCCCTACCCGGGCACGGTGCTGGCGCTGCGTCTGTCCGAGCATGGCGGGCAGTTGATCTGCCAGAAAGACAG CTTCCTGGCCGGCGCGCGCGGGGTGTCGCTGGGCATCGCCTTCCAGCGCAAGATCCTCACCGGCCTGTTCGGCGGCGAGG GCTTCATCATGCAGAAACTCGAAGGCGACGGATGGGTGTTCGTGCATGCCGGCGGCACGGTCGTCGAGCGCGAGCTGGGG CCGGGCGAGCGCATCGATGTGGACACCGGCTGCGTGGTCGCCTATCACGCCGGCGTGGACATGGACGTGCGCCGCGTTGC CGGCCTGAAGAGCATGTTCTTCGGCGGCGAAGGCGTGTTCCTGGCCACCCTCACCGGCCCGGGCAAGGTCTGGCTGCAAT CGCTGCCGTTCTCGCGCATGGCCGGCCGCATGCTGCAGGCCGCCCCGCAAGGCGGTGGCCAACAGCGCGGCGAGGGCTCG GTGCTGGGCGGCCTGGGCCGCTTGCTGGATGGCGATAACCGGTTCTGA
Upstream 100 bases:
>100_bases CCGCGTCACAACCACGCGCTGCAGACATGACCTTGGACACGGGACGCCGCCGCGGCGGTTGCGCGTAGACTCGCCGCACA CGCAGACAGGAGTCGTCCCG
Downstream 100 bases:
>100_bases GCGGTGACGCGGCGGGTTGGCGCGATGACGATTTGGATTCGGGGGGCGAAGCAAGCGTCGTGTCACCTCTGAAGGCGCGT GGCGACGCGTTTGTCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MAQWYFHNPGQADRLGPLDDASARAHAQRHPDALAWRDGLDGWTPARQLAELQGGLSAPPPLSGISGRADEIDYRIVGND MQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHAGQSGGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAKVA FAAPYPGTVLALRLSEHGGQLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVERELG PGERIDVDTGCVVAYHAGVDMDVRRVAGLKSMFFGGEGVFLATLTGPGKVWLQSLPFSRMAGRMLQAAPQGGGQQRGEGS VLGGLGRLLDGDNRF
Sequences:
>Translated_335_residues MAQWYFHNPGQADRLGPLDDASARAHAQRHPDALAWRDGLDGWTPARQLAELQGGLSAPPPLSGISGRADEIDYRIVGND MQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHAGQSGGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAKVA FAAPYPGTVLALRLSEHGGQLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVERELG PGERIDVDTGCVVAYHAGVDMDVRRVAGLKSMFFGGEGVFLATLTGPGKVWLQSLPFSRMAGRMLQAAPQGGGQQRGEGS VLGGLGRLLDGDNRF >Mature_334_residues AQWYFHNPGQADRLGPLDDASARAHAQRHPDALAWRDGLDGWTPARQLAELQGGLSAPPPLSGISGRADEIDYRIVGNDM QFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHAGQSGGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAKVAF AAPYPGTVLALRLSEHGGQLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVERELGP GERIDVDTGCVVAYHAGVDMDVRRVAGLKSMFFGGEGVFLATLTGPGKVWLQSLPFSRMAGRMLQAAPQGGGQQRGEGSV LGGLGRLLDGDNRF
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 35156; Mature: 35025
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQWYFHNPGQADRLGPLDDASARAHAQRHPDALAWRDGLDGWTPARQLAELQGGLSAPP CCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCCCCC PLSGISGRADEIDYRIVGNDMQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHA CCCCCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHHHCCEEEECCCEEEEEEECCCCCC GQSGGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAKVAFAAPYPGTVLALRLSEHGGQ CCCCCHHHHHHHHCCCEEEECCHHEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCE LICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVERELG EEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCEEEEECCC PGERIDVDTGCVVAYHAGVDMDVRRVAGLKSMFFGGEGVFLATLTGPGKVWLQSLPFSRM CCCEEECCCCEEEEEECCCCHHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHCCCHHHH AGRMLQAAPQGGGQQRGEGSVLGGLGRLLDGDNRF HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure AQWYFHNPGQADRLGPLDDASARAHAQRHPDALAWRDGLDGWTPARQLAELQGGLSAPP CEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCCCCC PLSGISGRADEIDYRIVGNDMQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHA CCCCCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHHHCCEEEECCCEEEEEEECCCCCC GQSGGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAKVAFAAPYPGTVLALRLSEHGGQ CCCCCHHHHHHHHCCCEEEECCHHEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCE LICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVERELG EEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCEEEEECCC PGERIDVDTGCVVAYHAGVDMDVRRVAGLKSMFFGGEGVFLATLTGPGKVWLQSLPFSRM CCCEEECCCCEEEEEECCCCHHHHHHHHHHHHEECCCCEEEEEECCCCHHHHHCCCHHHH AGRMLQAAPQGGGQQRGEGSVLGGLGRLLDGDNRF HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA