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The map label for this gene is 21244861

Identifier: 21244861

GI number: 21244861

Start: 4871768

End: 4872607

Strand: Reverse

Name: 21244861

Synonym: XAC4144

Alternate gene names: NA

Gene position: 4872607-4871768 (Counterclockwise)

Preceding gene: 21244862

Following gene: 21244860

Centisome position: 94.15

GC content: 67.02

Gene sequence:

>840_bases
GTGCCGCGCATGGCGCCGCCACCTTCTTCGATAAGGAACCGCGCGATGGATGCCACCGCACAGACCCTGCTTGCCCAAGG
CGAGCCGGCGCAGGCGTTGCAGCAACTGATCCAGCAGGTGCGCCGGCAACCGGCCGATGCAGCGCAGCGCGTGTTTCTGT
TTCAGTTGCTGGCCGTCCTCGGCCAGTGGTCGCGCGCCGCAGATCAGCTGCGTGCTTGCGGTGAACTGGATGCCACCACG
CAGCCCTTGGTCCACACCTATCTGGCGGTATTGCAGGGCGAGCAGACGCGCGCCGAGGTGTTTGCCGGTAAGCGGTTACC
GCGCGTGATGGGTGAGCCGGCCGAGTGGCTGGCAATGCATCTGCAGGCGCTGCAACTGGCGGCGCAAGGGCATGGCGAAC
AAGCAGCGGCGTTGCGGGCGCAGGCCTTCGAACGGGCACCAGCCAGTGCCGGCGTGCTCAATGGCGAACGCTTCCAATGG
CTCGCAGATGCCGACACCCGTTTCGGGCCCTGTATCGAGCTCATTCTCGATAGCGGCTATGCATGGGCCCCGCTCAGCCA
GATCCAGCAGCTGCGCATGCAGGCGCCGCTGGATCTGCGCGACACCGTGTGGGCGCCGGTGAGCGTGCTGTGGCGCAACG
GCGGCCAGGCCTTCGGCTACTTGCCGGTACGTTACCCCGGCAGCGAGCACCTGGATGCCGGCGAGCTGCAACTGGCGCGC
CGCACCGAATGGACCCTTGTCGCACAAGGCGAGATCGGCATGGGCCAGCGCATGTGGAGCACCGAGTCGCGCGAGATTGC
GCTGCTGGATGTGCGCGATGTGCAGTTCGACGCGGGCTGA

Upstream 100 bases:

>100_bases
GGTGCGGCACGCAGCGAGCGTGTAGACGCTGCTCTGCGCCAAGCGGATGTTGGCGTTGTGACGTTGGCTGCTTCCGATGG
CGGTCATGCGATAACTGGCG

Downstream 100 bases:

>100_bases
TTTCAATGGCCGAACTCACCACCACCGAACGCTTGCAGCCTTCGCTGCTGGACCGGCTCACCGATGCAGCGCCCAGTCAG
CGCGAAGAGAGCCGCGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: ImpE Family Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpE; SciE Type Virulence Protein; ImpE-Like Protein; Virulence Protein SciE Type Family Protein; ImpE Family T6SS E; ImpE Protein Superfamily Protein; Secretion Protein; Cytoplasmic Protein SciE

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPRMAPPPSSIRNRAMDATAQTLLAQGEPAQALQQLIQQVRRQPADAAQRVFLFQLLAVLGQWSRAADQLRACGELDATT
QPLVHTYLAVLQGEQTRAEVFAGKRLPRVMGEPAEWLAMHLQALQLAAQGHGEQAAALRAQAFERAPASAGVLNGERFQW
LADADTRFGPCIELILDSGYAWAPLSQIQQLRMQAPLDLRDTVWAPVSVLWRNGGQAFGYLPVRYPGSEHLDAGELQLAR
RTEWTLVAQGEIGMGQRMWSTESREIALLDVRDVQFDAG

Sequences:

>Translated_279_residues
MPRMAPPPSSIRNRAMDATAQTLLAQGEPAQALQQLIQQVRRQPADAAQRVFLFQLLAVLGQWSRAADQLRACGELDATT
QPLVHTYLAVLQGEQTRAEVFAGKRLPRVMGEPAEWLAMHLQALQLAAQGHGEQAAALRAQAFERAPASAGVLNGERFQW
LADADTRFGPCIELILDSGYAWAPLSQIQQLRMQAPLDLRDTVWAPVSVLWRNGGQAFGYLPVRYPGSEHLDAGELQLAR
RTEWTLVAQGEIGMGQRMWSTESREIALLDVRDVQFDAG
>Mature_278_residues
PRMAPPPSSIRNRAMDATAQTLLAQGEPAQALQQLIQQVRRQPADAAQRVFLFQLLAVLGQWSRAADQLRACGELDATTQ
PLVHTYLAVLQGEQTRAEVFAGKRLPRVMGEPAEWLAMHLQALQLAAQGHGEQAAALRAQAFERAPASAGVLNGERFQWL
ADADTRFGPCIELILDSGYAWAPLSQIQQLRMQAPLDLRDTVWAPVSVLWRNGGQAFGYLPVRYPGSEHLDAGELQLARR
TEWTLVAQGEIGMGQRMWSTESREIALLDVRDVQFDAG

Specific function: Unknown

COG id: COG4455

COG function: function code R; Protein of avirulence locus involved in temperature-dependent protein secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30798; Mature: 30667

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRMAPPPSSIRNRAMDATAQTLLAQGEPAQALQQLIQQVRRQPADAAQRVFLFQLLAVL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GQWSRAADQLRACGELDATTQPLVHTYLAVLQGEQTRAEVFAGKRLPRVMGEPAEWLAMH
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCHHHHHHH
LQALQLAAQGHGEQAAALRAQAFERAPASAGVLNGERFQWLADADTRFGPCIELILDSGY
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC
AWAPLSQIQQLRMQAPLDLRDTVWAPVSVLWRNGGQAFGYLPVRYPGSEHLDAGELQLAR
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHH
RTEWTLVAQGEIGMGQRMWSTESREIALLDVRDVQFDAG
CCCEEEEECCCCCCCCHHCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
PRMAPPPSSIRNRAMDATAQTLLAQGEPAQALQQLIQQVRRQPADAAQRVFLFQLLAVL
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GQWSRAADQLRACGELDATTQPLVHTYLAVLQGEQTRAEVFAGKRLPRVMGEPAEWLAMH
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCHHHHHHH
LQALQLAAQGHGEQAAALRAQAFERAPASAGVLNGERFQWLADADTRFGPCIELILDSGY
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC
AWAPLSQIQQLRMQAPLDLRDTVWAPVSVLWRNGGQAFGYLPVRYPGSEHLDAGELQLAR
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHH
RTEWTLVAQGEIGMGQRMWSTESREIALLDVRDVQFDAG
CCCEEEEECCCCCCCCHHCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA