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The map label for this gene is 21244860

Identifier: 21244860

GI number: 21244860

Start: 4871259

End: 4871762

Strand: Reverse

Name: 21244860

Synonym: XAC4143

Alternate gene names: NA

Gene position: 4871762-4871259 (Counterclockwise)

Preceding gene: 21244861

Following gene: 21244859

Centisome position: 94.13

GC content: 64.29

Gene sequence:

>504_bases
ATGGCCGAACTCACCACCACCGAACGCTTGCAGCCTTCGCTGCTGGACCGGCTCACCGATGCAGCGCCCAGTCAGCGCGA
AGAGAGCCGCGAGCAACGCGTGATTTCGGCCACGCGCCTGCGTGAGTGCGTCATTCGCGATCTGTCGTGGTTGCTCAATG
CCGTGAACCTGGAAACCAGCCGCCCGCTGGAAGCGCATCCGCAGGTGCGCAGCTCGGTACTGAATTACGGCATCCCTGAT
CTGGCCGGCGTCGCAGTGAGCGGCATCGATGCGGCCGCGCTGCAACAGCGCATTCGCCAGGCGATTCTGGCCTTCGAGCC
GCGGCTGATTCCCGAGACGCTGCGGGTGAGCGTGCATGCCGATGCCGCACGCATGGACCGGCGCTCGCTGTTGTTCACCA
TCGAATCGGAGATGTGGGCGCAGCCGCTGCCACTGAACCTGTATCTGAAGACTGCGCTGGATCTGGAAACAGGCCGGCTC
GATGTCGTCGAAGGGAACGGCTGA

Upstream 100 bases:

>100_bases
AAGGCGAGATCGGCATGGGCCAGCGCATGTGGAGCACCGAGTCGCGCGAGATTGCGCTGCTGGATGTGCGCGATGTGCAG
TTCGACGCGGGCTGATTTCA

Downstream 100 bases:

>100_bases
CGTCATGGACCCGCGCCTACTGCCGTACTACACCCGCGAGTTGCAGCACGTGCGCGACATGGGCGCGGAGTTTGCGCGCG
AGTATCCCAAGATCGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Replication/Virulence Associated Protein; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpF; Type VI Secretion System Lysozyme-Related Family

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MAELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETSRPLEAHPQVRSSVLNYGIPD
LAGVAVSGIDAAALQQRIRQAILAFEPRLIPETLRVSVHADAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRL
DVVEGNG

Sequences:

>Translated_167_residues
MAELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETSRPLEAHPQVRSSVLNYGIPD
LAGVAVSGIDAAALQQRIRQAILAFEPRLIPETLRVSVHADAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRL
DVVEGNG
>Mature_166_residues
AELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETSRPLEAHPQVRSSVLNYGIPDL
AGVAVSGIDAAALQQRIRQAILAFEPRLIPETLRVSVHADAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRLD
VVEGNG

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18651; Mature: 18519

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETS
CCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPLEAHPQVRSSVLNYGIPDLAGVAVSGIDAAALQQRIRQAILAFEPRLIPETLRVSVHA
CCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEECC
DAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRLDVVEGNG
CHHHHCCHHHEEEECHHHCCCCCCCEEEEHHHCCCCCCCEEEEECCC
>Mature Secondary Structure 
AELTTTERLQPSLLDRLTDAAPSQREESREQRVISATRLRECVIRDLSWLLNAVNLETS
CCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RPLEAHPQVRSSVLNYGIPDLAGVAVSGIDAAALQQRIRQAILAFEPRLIPETLRVSVHA
CCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEECC
DAARMDRRSLLFTIESEMWAQPLPLNLYLKTALDLETGRLDVVEGNG
CHHHHCCHHHEEEECHHHCCCCCCCEEEEHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA