| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244793
Identifier: 21244793
GI number: 21244793
Start: 4773506
End: 4774549
Strand: Reverse
Name: 21244793
Synonym: XAC4076
Alternate gene names: NA
Gene position: 4774549-4773506 (Counterclockwise)
Preceding gene: 21244794
Following gene: 21244792
Centisome position: 92.25
GC content: 63.7
Gene sequence:
>1044_bases ATGTTTCGCGATTTCAGAATGTCGTTGTTGGTCGCCGTCATCTGCCTGGGCCTGGCTGCGTGGTGGGGCCACACCTCATC GATGGGGATCTGGCAGGCGCTGTGGCTGTGCCTGGTGCTGAGCGTGCTGGAAGTGTCGTTGTCGTTCGACAACGCGGTGG TCAACGCCGGCGTGCTCAAGCACATGAACGCGTTCTGGCAAAAGTTGTTCCTGACCGTGGGCATCCTGATCGCCGTGTTC GGCATGCGCCTGGTGTTCCCGATCGTGATCGTGTCGGTGGCCACCGGCATGGGCCTGGTGCCGGTGATGCAGATGGCACT GAAGGAGCCGGACCGCTACAGCCAGGTGCTGACCGATAACTACCCCTCCATCGCCGCCTTCGGTGGCATGTTCCTGCTGC TGGTGTTCCTGAATTTCCTGTTCGACCAGGAGCGCAAGCTGCACTGGCTGGGCCCGGTGGAGCGGCTGGTCGGCAAGCTG GGCAAGGCCGATGCGATGTCGGTGATCGTGGCGGTGTCGGTGCTGCTGGGCACCAAGCTGTTCCTGCCGGACGGCATCTT CCAGAGCGTGCTGTTCGCAGGCCTGGGCGGCATCCTGCTGTATCTGCTGGTCGGCAGCGTGGATGCGTTGTTCGAGGCCG AAGAGAGCGAAGACGGCAGCATGGGCCCGGCCAAGCGTTCGGGCATCGCCGCCTTCCTGTATCTGGAAGTGCTGGACGCC TCGTTCTCGTTCGATGGTGTGATCGGCGCCTTCGCCATCACCCGCGACGTGGTGATCATCATGCTGGGCCTGGCGATCGG CGCGATGTTCGTGCGCTCGATGACGGTCTACCTGGTGCACAAGGGCACCCTGGACGAGTTCGTGTTCCTGGAGCACGGCG CGCATTACGCCATCGGCGTGCTGGCGATCATCATGCTGGTGGGCACGGTCTACCACGTGCCGGAGGTGCTGACCGGCCTG ATCGGCGTGGCCTTCATCGCCGCCTCGGTGTGGTCGTCGATCCGCTACCGCAAGCGTCACCACATCGGGCCGACCGAGAT CTGA
Upstream 100 bases:
>100_bases GTCACGCCGCGGTCCCCCATCCTCCACCGCACGCCGGATCTGCCGGGCCTCGCCCTGGCCTATTGCTCCGGCTGTCGTCT CGGCCCGCCTGGGAGTGTCA
Downstream 100 bases:
>100_bases TCTTGCGCACGGGCAGCGCGCAAGGCGTCACGCCGTTCACTCGAGAGCGGCTGACAGCGCCTTGCTGGCCATCGGGCGGG CGTCGCTAGTTCTGTCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MFRDFRMSLLVAVICLGLAAWWGHTSSMGIWQALWLCLVLSVLEVSLSFDNAVVNAGVLKHMNAFWQKLFLTVGILIAVF GMRLVFPIVIVSVATGMGLVPVMQMALKEPDRYSQVLTDNYPSIAAFGGMFLLLVFLNFLFDQERKLHWLGPVERLVGKL GKADAMSVIVAVSVLLGTKLFLPDGIFQSVLFAGLGGILLYLLVGSVDALFEAEESEDGSMGPAKRSGIAAFLYLEVLDA SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSMTVYLVHKGTLDEFVFLEHGAHYAIGVLAIIMLVGTVYHVPEVLTGL IGVAFIAASVWSSIRYRKRHHIGPTEI
Sequences:
>Translated_347_residues MFRDFRMSLLVAVICLGLAAWWGHTSSMGIWQALWLCLVLSVLEVSLSFDNAVVNAGVLKHMNAFWQKLFLTVGILIAVF GMRLVFPIVIVSVATGMGLVPVMQMALKEPDRYSQVLTDNYPSIAAFGGMFLLLVFLNFLFDQERKLHWLGPVERLVGKL GKADAMSVIVAVSVLLGTKLFLPDGIFQSVLFAGLGGILLYLLVGSVDALFEAEESEDGSMGPAKRSGIAAFLYLEVLDA SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSMTVYLVHKGTLDEFVFLEHGAHYAIGVLAIIMLVGTVYHVPEVLTGL IGVAFIAASVWSSIRYRKRHHIGPTEI >Mature_347_residues MFRDFRMSLLVAVICLGLAAWWGHTSSMGIWQALWLCLVLSVLEVSLSFDNAVVNAGVLKHMNAFWQKLFLTVGILIAVF GMRLVFPIVIVSVATGMGLVPVMQMALKEPDRYSQVLTDNYPSIAAFGGMFLLLVFLNFLFDQERKLHWLGPVERLVGKL GKADAMSVIVAVSVLLGTKLFLPDGIFQSVLFAGLGGILLYLLVGSVDALFEAEESEDGSMGPAKRSGIAAFLYLEVLDA SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSMTVYLVHKGTLDEFVFLEHGAHYAIGVLAIIMLVGTVYHVPEVLTGL IGVAFIAASVWSSIRYRKRHHIGPTEI
Specific function: Unknown
COG id: COG2899
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37835; Mature: 37835
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRDFRMSLLVAVICLGLAAWWGHTSSMGIWQALWLCLVLSVLEVSLSFDNAVVNAGVLK CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMNAFWQKLFLTVGILIAVFGMRLVFPIVIVSVATGMGLVPVMQMALKEPDRYSQVLTDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC YPSIAAFGGMFLLLVFLNFLFDQERKLHWLGPVERLVGKLGKADAMSVIVAVSVLLGTKL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH FLPDGIFQSVLFAGLGGILLYLLVGSVDALFEAEESEDGSMGPAKRSGIAAFLYLEVLDA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHC SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSMTVYLVHKGTLDEFVFLEHGAHYAIGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCHHHHHH LAIIMLVGTVYHVPEVLTGLIGVAFIAASVWSSIRYRKRHHIGPTEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFRDFRMSLLVAVICLGLAAWWGHTSSMGIWQALWLCLVLSVLEVSLSFDNAVVNAGVLK CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMNAFWQKLFLTVGILIAVFGMRLVFPIVIVSVATGMGLVPVMQMALKEPDRYSQVLTDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCC YPSIAAFGGMFLLLVFLNFLFDQERKLHWLGPVERLVGKLGKADAMSVIVAVSVLLGTKL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHH FLPDGIFQSVLFAGLGGILLYLLVGSVDALFEAEESEDGSMGPAKRSGIAAFLYLEVLDA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHC SFSFDGVIGAFAITRDVVIIMLGLAIGAMFVRSMTVYLVHKGTLDEFVFLEHGAHYAIGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCHHHHHH LAIIMLVGTVYHVPEVLTGLIGVAFIAASVWSSIRYRKRHHIGPTEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA