| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yfiQ [H]
Identifier: 21244794
GI number: 21244794
Start: 4774656
End: 4777364
Strand: Reverse
Name: yfiQ [H]
Synonym: XAC4077
Alternate gene names: 21244794
Gene position: 4777364-4774656 (Counterclockwise)
Preceding gene: 21244795
Following gene: 21244793
Centisome position: 92.31
GC content: 69.66
Gene sequence:
>2709_bases ATGAGTACGTACCACCTGCAGCAGGTCTTTCGTCCTAGCACCGTGGCGGTGGTGGGGGGCAGCCCGCGTGATCGTTCGGC CGGGCGGGCGGTGGTGCGCAACCTGCGCGCAGCCGGCTTTCCTGGCCAGATCGGCTGGGTGAGCCCGCGCTATAGCGAGA TCGACGGCGTGCGCACGGTGGCGCGGCTGACCGATCTGCCGTGGGTGCCCGACCTGGTGGTGATCACCGCGCCGGCGCGC ATCGTGCCGCGCATCGTCTCCATCGCCGCGCGGCGTGGTGTGGCCGCGGCGATCATCCTGACTGCCGGTTTGGGCAGCGG TCCCGGCTCGCCGGCCGCACGCATGGAAGCGGCCGCGCGCGCCAAAGGTATGCGCATCCTCGGCCCGCACTGCCTGGGCG TGATCGCCCCGCATGCGCGACTCAATGCCAGCATCGCCGCGCATTGTCCGCAGGCCGGCGATCTGGCGCTGATTTCCGAA TCCAGCGCCATTGCCGCCGCGCTGGTGGAGTGGGGCGTGGCGCGCTCGGTCGGGTTTTCGGCGGTGGTGTCGCTGGGCGA TACGCTGGATGTGGATTTCGGCGATCTGCTCGACTACTTCGCCACCGACTACCGCACCCGCGCGATTTTGCTGTACGTCG AACGCATCGGCGATGCGCGCAAGTTCATGTCGGCCGCACGTGCCGCCGCGCGTGCCAAGCCTGTTGTGGTGGTCAAATCC GGCCGCCAGTACCGCATCAATCCCAATGCCGACACCCACGCGCAGGCGCTGGCCGGCTCGGATGCGGTGTATGGCGCCGC GTTCGCGCGCGCCGGATTGTTGCGGGTGGGTGCGCTGGACGAGCTGTTCGCCGCCGCCGAAACCCTGGGCAGGCTCGGCA GTTTCCCGGGCCGGCGCCTGGCCATCCTGAGCAACGGCGGCGGGGTGGGGCAGCTGGCGGTGGATCAACTGGTGTTGCGT GGCGGCACCCTGGCCGAGTTGTCGCCCAAGACGCTGGAAAAACTCGATCAATCGCTGCCGGAAGGCTGGTCGCGCAGCAA CCCGGTCGACATCATTGTCGACGCCGACGGCGCGCGCTATGCCGCGGCGATTGAAGCGCTGCTGGACGATCCGGAGAACG ACGCGCTGCTGGTGGTCAATGTGCCCACCGCGTTCACCTCCTCGGCCGATGCGGCCAAGGCGCTGACCCGCGCGCTGGAC CAGCGCAACCGCTACCAGCGCGACAAACCGGTGTTTGCGGTGTGGCTGGGCCAGGACGACGCGGCGATTGCCGCGCTCAA CGCCGCGCGCGTGCCTACCTATGCCACCGAATCGGACGCGGTCCGCGGCTTCACCCACCTGGTGCGCTACCGCGAGGCGC AGGCGGCGCTGATGGAGACCCCGCCCAGCCTGCCGGAAGACTTCGTTGTGGATGCCGGCATCGCGCGGACGCTGGTGGAA GAGGCCCTGGCGGCCGGCCGGCGCTGGCTGGATCCGGTCGCCACCAACCGCCTGCTGGCGGCCTACGGCATCCCGATCGT GCCGCTGCAGGTGGCCGCCACCGCCAACGAGGCCGCATTGCTGGCCGACCCGTTACTGGCAGTCGGCCGCACCGTGACAT TGAAAGTGTTGTCCAGCGAGATCGCGCACAAGTCCGACGTGGATGGCGTGCGCCTGAACCTGTCCAGCGTGGCGGCGGTG CGCGAAGCGGCCACTGGCATCCTGGCGCGTGCGCGCGCGGCGCATCCCACTGCGGCGATCGAAGGGGTGATCGTGCAGCC CACCGTGCTGCGGCCGAAGGCGCGCGAACTGATCGCCGGTATTGCCGACGACCCGGTGTTCGGTCCGGCGATCGTGTTCG GGCGCGGCGGCACCGCGGTGGAGGTCATCAACGACCGCGAGCTTGCCCTGCCGCCGCTGGACCTGCGCCTGGCCCACGAA CTGATCGGCCGCACCCGCGTCTCGCGCATCCTCAAGGCCTACCGCGACGTGCCGGCCGCCGACGAGCGCGCGGTGGCGCT GGTGCTGGTCAAGCTGGCGCAGCTGGCGGCCGACATCCCCGAAATCACCGAGCTGGACATCAACCCGCTGCTGGCCGACC GCGACGGCGTGATCGCGCTGGACGCGCGCGTGGCGGTGGCGCCGGCGCGCAAGCTGCACAAGGGCCGCGGCCATCCGCGC TTTGCGATCTTCCCGTACCCCAAGGAATGGGAGCGCCAGATCGGCCTGGGCGATGGCACCCATGCGCTGGTGCGCCCGGT GCGCCCGGAAGACGACGCGCTGTTCCGCGCCTTCTTCGCCCGCGTCACCGACGAGGACCTGCGCCTGCGCTTCTTCCAGT CGGTGAAGCATTTCAGCCATGAATTCATTGCCCGGCTGACCCAGCTCGATTACGCCCGCTCCATCGCGCTGGTGGCCATC GACCCCAGGACCGGCGACATGCTCGGCGCGGTGCGCCTGCACGCCGACGCCGATTACCAGCGCGGCGAGTACGGCATCCT GATCCGCTCGGACCTCAAGGGCCACGGCATCGGCTGGCAGCTGATGCGTATCATGATCGAGTACGCGCGCTGGCTGGGTC TCAAGCAGATCGAAGGCCAGGTGCTGCGCGAGAACCGTACCATGCTGGCGATGTGCCAGAGCCTGGGCTTTGGCGTGCGC CCGGATCCGGACGATGCAACCCTGATGGCGGTGACACTCCCTATAATGGGCGAGCCGCGCCCGGCCTGA
Upstream 100 bases:
>100_bases GTAATCACGGATGCATGCATGTGCGCATGCATCCGTCACCCCATGCCCTGAAACGCCAGTGCGTGTACCGTAGTGCGATG GCATTCGCGTCCCCCGTCCG
Downstream 100 bases:
>100_bases CGTTGCGTCACGCCGCGGTCCCCCATCCTCCACCGCACGCCGGATCTGCCGGGCCTCGCCCTGGCCTATTGCTCCGGCTG TCGTCTCGGCCCGCCTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MSTYHLQQVFRPSTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTVARLTDLPWVPDLVVITAPAR IVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISE SSAIAAALVEWGVARSVGFSAVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS GRQYRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRLAILSNGGGVGQLAVDQLVLR GGTLAELSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARYAAAIEALLDDPENDALLVVNVPTAFTSSADAAKALTRALD QRNRYQRDKPVFAVWLGQDDAAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARTLVE EALAAGRRWLDPVATNRLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSSEIAHKSDVDGVRLNLSSVAAV REAATGILARARAAHPTAAIEGVIVQPTVLRPKARELIAGIADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHE LIGRTRVSRILKAYRDVPAADERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSHEFIARLTQLDYARSIALVAI DPRTGDMLGAVRLHADADYQRGEYGILIRSDLKGHGIGWQLMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVR PDPDDATLMAVTLPIMGEPRPA
Sequences:
>Translated_902_residues MSTYHLQQVFRPSTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTVARLTDLPWVPDLVVITAPAR IVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISE SSAIAAALVEWGVARSVGFSAVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS GRQYRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRLAILSNGGGVGQLAVDQLVLR GGTLAELSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARYAAAIEALLDDPENDALLVVNVPTAFTSSADAAKALTRALD QRNRYQRDKPVFAVWLGQDDAAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARTLVE EALAAGRRWLDPVATNRLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSSEIAHKSDVDGVRLNLSSVAAV REAATGILARARAAHPTAAIEGVIVQPTVLRPKARELIAGIADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHE LIGRTRVSRILKAYRDVPAADERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSHEFIARLTQLDYARSIALVAI DPRTGDMLGAVRLHADADYQRGEYGILIRSDLKGHGIGWQLMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVR PDPDDATLMAVTLPIMGEPRPA >Mature_901_residues STYHLQQVFRPSTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTVARLTDLPWVPDLVVITAPARI VPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAARAKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISES SAIAAALVEWGVARSVGFSAVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKSG RQYRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRLAILSNGGGVGQLAVDQLVLRG GTLAELSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARYAAAIEALLDDPENDALLVVNVPTAFTSSADAAKALTRALDQ RNRYQRDKPVFAVWLGQDDAAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARTLVEE ALAAGRRWLDPVATNRLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSSEIAHKSDVDGVRLNLSSVAAVR EAATGILARARAAHPTAAIEGVIVQPTVLRPKARELIAGIADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHEL IGRTRVSRILKAYRDVPAADERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPRF AIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSHEFIARLTQLDYARSIALVAID PRTGDMLGAVRLHADADYQRGEYGILIRSDLKGHGIGWQLMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVRP DPDDATLMAVTLPIMGEPRPA
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=883, Percent_Identity=37.8255945639864, Blast_Score=559, Evalue=1e-160,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 96565; Mature: 96434
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYHLQQVFRPSTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTV CCCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ARLTDLPWVPDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAAR HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHH AKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFS HCCCEEECCHHHHHCCCCHHCCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHH AVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS HHHHCCCCCCCCHHHHHHHHHHCCCHHEEEEEHHHHCHHHHHHHHHHHHHCCCCEEEEEC GRQYRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRL CCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE AILSNGGGVGQLAVDQLVLRGGTLAELSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARY EEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH AAAIEALLDDPENDALLVVNVPTAFTSSADAAKALTRALDQRNRYQRDKPVFAVWLGQDD HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC AAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARTLVE CCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHH EALAAGRRWLDPVATNRLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSSE HHHHCCHHHCCHHHHCCCHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCEEEEHHHHHH IAHKSDVDGVRLNLSSVAAVREAATGILARARAAHPTAAIEGVIVQPTVLRPKARELIAG HCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCHHHHHHHHC IADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHELIGRTRVSRILKAYRDVPAA CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR CHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEECEEEHHHHHHHHCCCCCCE FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSH EEEECCCHHHHHHCCCCCCCHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EFIARLTQLDYARSIALVAIDPRTGDMLGAVRLHADADYQRGEYGILIRSDLKGHGIGWQ HHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHH LMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVRPDPDDATLMAVTLPIMGEPR HHHHHHHHHHHCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC PA CC >Mature Secondary Structure STYHLQQVFRPSTVAVVGGSPRDRSAGRAVVRNLRAAGFPGQIGWVSPRYSEIDGVRTV CCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ARLTDLPWVPDLVVITAPARIVPRIVSIAARRGVAAAIILTAGLGSGPGSPAARMEAAAR HHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHH AKGMRILGPHCLGVIAPHARLNASIAAHCPQAGDLALISESSAIAAALVEWGVARSVGFS HCCCEEECCHHHHHCCCCHHCCCCHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHH AVVSLGDTLDVDFGDLLDYFATDYRTRAILLYVERIGDARKFMSAARAAARAKPVVVVKS HHHHCCCCCCCCHHHHHHHHHHCCCHHEEEEEHHHHCHHHHHHHHHHHHHCCCCEEEEEC GRQYRINPNADTHAQALAGSDAVYGAAFARAGLLRVGALDELFAAAETLGRLGSFPGRRL CCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE AILSNGGGVGQLAVDQLVLRGGTLAELSPKTLEKLDQSLPEGWSRSNPVDIIVDADGARY EEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHH AAAIEALLDDPENDALLVVNVPTAFTSSADAAKALTRALDQRNRYQRDKPVFAVWLGQDD HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC AAIAALNAARVPTYATESDAVRGFTHLVRYREAQAALMETPPSLPEDFVVDAGIARTLVE CCEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHH EALAAGRRWLDPVATNRLLAAYGIPIVPLQVAATANEAALLADPLLAVGRTVTLKVLSSE HHHHCCHHHCCHHHHCCCHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCEEEEHHHHHH IAHKSDVDGVRLNLSSVAAVREAATGILARARAAHPTAAIEGVIVQPTVLRPKARELIAG HCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCCHHHHHHHHC IADDPVFGPAIVFGRGGTAVEVINDRELALPPLDLRLAHELIGRTRVSRILKAYRDVPAA CCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DERAVALVLVKLAQLAADIPEITELDINPLLADRDGVIALDARVAVAPARKLHKGRGHPR CHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECCCCEEEEECEEEHHHHHHHHCCCCCCE FAIFPYPKEWERQIGLGDGTHALVRPVRPEDDALFRAFFARVTDEDLRLRFFQSVKHFSH EEEECCCHHHHHHCCCCCCCHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EFIARLTQLDYARSIALVAIDPRTGDMLGAVRLHADADYQRGEYGILIRSDLKGHGIGWQ HHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHH LMRIMIEYARWLGLKQIEGQVLRENRTMLAMCQSLGFGVRPDPDDATLMAVTLPIMGEPR HHHHHHHHHHHCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]