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The map label for this gene is comM [H]

Identifier: 21244674

GI number: 21244674

Start: 4651342

End: 4651896

Strand: Direct

Name: comM [H]

Synonym: XAC3955

Alternate gene names: 21244674

Gene position: 4651342-4651896 (Clockwise)

Preceding gene: 21244673

Following gene: 21244675

Centisome position: 89.87

GC content: 65.59

Gene sequence:

>555_bases
ATGGACAGATCCGCCGCCCAAAATTTCCTTACGCCCGTAGGCGATTTGAGAATAGTCCATTACGTAGCTTACGTGTGCAC
GTCCGGCTGGGCAGGCGATGGCAGCGGGCGCTGCCGCTGCAGCAGCGACAGCATCCGCCGCTACCGCAGCCGCATCTCCG
GCCCGTTGCTGGACCGCATCGATCTGCATGTCGAAGTGCCACGCCTCCCTCCGCAGGCGCTGCGCAGCGGCAACCTCGGT
GAAGACAGCGCCAGCGTACGTGCCCGCGTGGTCGCCGCGCGACAACGACAGCTTGCACGTGGTGCGCTGCCCAATGCGCA
ACTGGACCAGGCCGACACCGACCGCCATTGCCGTCTGCAACACAACGATCAGGTGCTGCTGGAGCGCGCCATCGAACAGC
TGCAGCTGTCCGCACGCTCGATGCATCGCATCCTGCGCGTTGCGCGCACCATCGCCGATCTCGACGACAGCGCAGACATC
GCCACACGCCATCTCACCGAAGCGATCGGCTACCGCAAACTGGATCGTGCGCTTGGCGCCGCCAGCGCGGCGTAG

Upstream 100 bases:

>100_bases
AAATTACGCAAAATCCAAAGGTCCGAACGCAACACCTCGGAAAAATAGGTCCTTCGGTACCGGCGAGCATTTCTGATTCG
TCCATCATTAAACTTGGGGT

Downstream 100 bases:

>100_bases
CGCGCTCGTCCGGTCAACCGGGCCGCGATCCGCAAGCCATGCGCGGGCGTGCCGCCCTGGTACTGCAGAGCGCCCGCTTT
GCCAGGACGTTATGCCGGTG

Product: competence-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDRSAAQNFLTPVGDLRIVHYVAYVCTSGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRIDLHVEVPRLPPQALRSGNLG
EDSASVRARVVAARQRQLARGALPNAQLDQADTDRHCRLQHNDQVLLERAIEQLQLSARSMHRILRVARTIADLDDSADI
ATRHLTEAIGYRKLDRALGAASAA

Sequences:

>Translated_184_residues
MDRSAAQNFLTPVGDLRIVHYVAYVCTSGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRIDLHVEVPRLPPQALRSGNLG
EDSASVRARVVAARQRQLARGALPNAQLDQADTDRHCRLQHNDQVLLERAIEQLQLSARSMHRILRVARTIADLDDSADI
ATRHLTEAIGYRKLDRALGAASAA
>Mature_184_residues
MDRSAAQNFLTPVGDLRIVHYVAYVCTSGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRIDLHVEVPRLPPQALRSGNLG
EDSASVRARVVAARQRQLARGALPNAQLDQADTDRHCRLQHNDQVLLERAIEQLQLSARSMHRILRVARTIADLDDSADI
ATRHLTEAIGYRKLDRALGAASAA

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=142, Percent_Identity=46.4788732394366, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 20301; Mature: 20301

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSAAQNFLTPVGDLRIVHYVAYVCTSGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRI
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCCHHHHH
DLHVEVPRLPPQALRSGNLGEDSASVRARVVAARQRQLARGALPNAQLDQADTDRHCRLQ
CCEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEC
HNDQVLLERAIEQLQLSARSMHRILRVARTIADLDDSADIATRHLTEAIGYRKLDRALGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAA
CCCC
>Mature Secondary Structure
MDRSAAQNFLTPVGDLRIVHYVAYVCTSGWAGDGSGRCRCSSDSIRRYRSRISGPLLDRI
CCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHCCCHHHHH
DLHVEVPRLPPQALRSGNLGEDSASVRARVVAARQRQLARGALPNAQLDQADTDRHCRLQ
CCEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEC
HNDQVLLERAIEQLQLSARSMHRILRVARTIADLDDSADIATRHLTEAIGYRKLDRALGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]