| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aceK
Identifier: 21244556
GI number: 21244556
Start: 4507087
End: 4508826
Strand: Reverse
Name: aceK
Synonym: XAC3832
Alternate gene names: 21244556
Gene position: 4508826-4507087 (Counterclockwise)
Preceding gene: 21244557
Following gene: 21244553
Centisome position: 87.12
GC content: 62.76
Gene sequence:
>1740_bases ATGAACCATCCATCGTTGCCACCACAATCCGAGCGCCGTGCGCTGGCGATCGCCCAGGCCGTGTACGAAGCGTTCGAGGA CTATCACGCGCGCTTTTCCGAAATCACCGCATGCGCCAAACAGCGGTTCGAAACACGCGATTGGAGCGGCGCGCGCGAAG ACGCAGTGGCGCGCATCGCGCTCTACGACCAATACATCGCCGAATGCATGTTGCGTCTGCGCGCAGTACTGCTGGGTCAG GCGCACGACCGCGCGCTATGGATGCGTGCGCGCGATCGTTACGCTGCGTTGCTGAGCGGGTTGATCGACCAGGAGTTGTA CAAGACGTTCTACAACACCCTGACCCGGCGCTACTTCGGTACCCACGGCGTCGATGCGGACATCGAATTCATCGCCCTGG ATATCGAACCGACCGACGCCATCACCGTGCCTGTTGCGCGCCACACCTATGCGGTCTCGCCCGGCCGCCTGACCGACATG CTGGTGCGGGTGCTGGGCGACTACGCGTTCGCCGTGCCGTATGCGCACCGCACCCGCTGCGCGGCTGCCATCGCGGTGCG TCTGCTAGACGACCTGGCGCATTGGGGCGAGCATCCGGTGCGCAGCGTGGAATTGCTGGAGACGGTGTTCTATCGCGAGC GGCGTGCGTATCTGGTCGGACGCGTGTTCGGCGAACATCGCTTTTCGCCATGCGTGATCGCGCTGATCAACGACGACGCC GGCCTGCGCGCCGAAGCGGTGCTGACCCGACGCAGCGATGTCGCGCAATTGTTCAGTAACTCGCGCAGCTATTTTCAAGC CGACCTGTCCACTGTCGGCGATGCGGTGGTGTTCCTGCGCAGCCTGCTCACCCACAAACCGGTCGATGAGCTATACACGA TGCTGGGCCGCGCCAAGCAGGGCAAGACCGAGCGTTACCGCACGTTTTTCAGCCATTTTCAGGCGCATCCGTCCGAACAG CTGGTGCACGCCGATGGCACTCCCGGCATGGTCATGGTGGTCTTTACGCTGCCCAGTTATCCGCTGGTCTTCAAACTCAT TCGCGACCGCTTTGCGTATCCCAAAACCATGAGCCGCGCGCAGGTGGAGGGTAAGTACGAATTGGTCTTCCAGCTCGACC GCATCGGCCGCCTGCTCGACGCGCAGCCGTATCGTTTCCTGCGTTTCCCCAAGGCGCGCTTTTCGCCGGCGCTGCTGCAA GAGCTGCAGACCAGCTGCGCGATGAGCCTGAGCGAAGACGGCGACGATGTCCTGATCGCACTGTGCTATGTGCAGCGCCG GTTGCGCCCGTTGAATTTGTACCTGCGCGAACAGTTGCCCGAAGCCGCGCATGCCGCAGCGCTGGACTACGGCCAAGCCA TCAAGGACATGGCGCGCAACAACATCTTTCCCGGCGACATGTTGCTGAAGAATTTCGGCATTACCCGCCATCAGCGCGCG GTGTTCTACGACTACGACGAGCTGTGCCTGATCACCGAATGCAACTTCCGCGATTGGCCGACACCCGCCACCTACGAAGA ACAGATGGCCGCAGAACCCTGGTTCCATGTCGGCCCGCGCGACGTCTTTCCCGAGCGCTTCGCCTTGTTCATGGGCCTGC CCTCCTCGCAACTGGAAGCGGTCAAGCACCAGCACCCGGAACTGTTCGACCCACGCTGGTGGCGCGACCTGCAGAGCCGG CTTCGCGACGACGATTATCCCGACACCCCGCCATATGCGGAGTCGCGCAGGCTGGCCTAG
Upstream 100 bases:
>100_bases GGCTACAGGGCCAGGCGCGCGAACACGCCGCGCATGCGCAACAGGCGACCGCCACGCCATTGGCCGCGCGCCGCCGCAAG CGCTCCGGGACACCGTCGCC
Downstream 100 bases:
>100_bases AGCGCTGCGGAGCGCTCGCCGCGCAGCTTACCTTGGCGCCAGCCCAGCCCAGCCCAGCCGAGCCGGCGCCACGCAGCACC CGCTCCGCACAGCTGGCGGC
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MNHPSLPPQSERRALAIAQAVYEAFEDYHARFSEITACAKQRFETRDWSGAREDAVARIALYDQYIAECMLRLRAVLLGQ AHDRALWMRARDRYAALLSGLIDQELYKTFYNTLTRRYFGTHGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDM LVRVLGDYAFAVPYAHRTRCAAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDDA GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQGKTERYRTFFSHFQAHPSEQ LVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRAQVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQ ELQTSCAMSLSEDGDDVLIALCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA VFYDYDELCLITECNFRDWPTPATYEEQMAAEPWFHVGPRDVFPERFALFMGLPSSQLEAVKHQHPELFDPRWWRDLQSR LRDDDYPDTPPYAESRRLA
Sequences:
>Translated_579_residues MNHPSLPPQSERRALAIAQAVYEAFEDYHARFSEITACAKQRFETRDWSGAREDAVARIALYDQYIAECMLRLRAVLLGQ AHDRALWMRARDRYAALLSGLIDQELYKTFYNTLTRRYFGTHGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDM LVRVLGDYAFAVPYAHRTRCAAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDDA GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQGKTERYRTFFSHFQAHPSEQ LVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRAQVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQ ELQTSCAMSLSEDGDDVLIALCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA VFYDYDELCLITECNFRDWPTPATYEEQMAAEPWFHVGPRDVFPERFALFMGLPSSQLEAVKHQHPELFDPRWWRDLQSR LRDDDYPDTPPYAESRRLA >Mature_579_residues MNHPSLPPQSERRALAIAQAVYEAFEDYHARFSEITACAKQRFETRDWSGAREDAVARIALYDQYIAECMLRLRAVLLGQ AHDRALWMRARDRYAALLSGLIDQELYKTFYNTLTRRYFGTHGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDM LVRVLGDYAFAVPYAHRTRCAAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDDA GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQGKTERYRTFFSHFQAHPSEQ LVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRAQVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQ ELQTSCAMSLSEDGDDVLIALCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA VFYDYDELCLITECNFRDWPTPATYEEQMAAEPWFHVGPRDVFPERFALFMGLPSSQLEAVKHQHPELFDPRWWRDLQSR LRDDDYPDTPPYAESRRLA
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family
Homologues:
Organism=Escherichia coli, GI1790446, Length=566, Percent_Identity=34.6289752650177, Blast_Score=336, Evalue=2e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACEK_XANAC (Q8PFZ0)
Other databases:
- EMBL: AE008923 - RefSeq: NP_644138.1 - GeneID: 1157903 - GenomeReviews: AE008923_GR - KEGG: xac:XAC3832 - NMPDR: fig|190486.1.peg.3782 - HOGENOM: HBG298593 - OMA: RMTPLNI - ProtClustDB: PRK02946 - BioCyc: XAXO190486:XAC3832-MONOMER - BRENDA: 2.7.11.5 - GO: GO:0005737 - HAMAP: MF_00747 - InterPro: IPR010452 - PIRSF: PIRSF000719 - ProDom: PD043552
Pfam domain/function: PF06315 AceK
EC number: =2.7.11.5
Molecular weight: Translated: 66729; Mature: 66729
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: ACT_SITE 380-380 BINDING 345-345
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPSLPPQSERRALAIAQAVYEAFEDYHARFSEITACAKQRFETRDWSGAREDAVARIA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LYDQYIAECMLRLRAVLLGQAHDRALWMRARDRYAALLSGLIDQELYKTFYNTLTRRYFG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC THGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDMLVRVLGDYAFAVPYAHRTRC CCCCCCCEEEEEEEECCCCCEEECEECCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHH AAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDDA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQ CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC GKTERYRTFFSHFQAHPSEQLVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRA CCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHH QVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQELQTSCAMSLSEDGDDVLIA HCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH LCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCE VFYDYDELCLITECNFRDWPTPATYEEQMAAEPWFHVGPRDVFPERFALFMGLPSSQLEA EEECCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHCHHHHHHHHCCCHHHHHH VKHQHPELFDPRWWRDLQSRLRDDDYPDTPPYAESRRLA HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNHPSLPPQSERRALAIAQAVYEAFEDYHARFSEITACAKQRFETRDWSGAREDAVARIA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LYDQYIAECMLRLRAVLLGQAHDRALWMRARDRYAALLSGLIDQELYKTFYNTLTRRYFG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC THGVDADIEFIALDIEPTDAITVPVARHTYAVSPGRLTDMLVRVLGDYAFAVPYAHRTRC CCCCCCCEEEEEEEECCCCCEEECEECCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHH AAAIAVRLLDDLAHWGEHPVRSVELLETVFYRERRAYLVGRVFGEHRFSPCVIALINDDA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GLRAEAVLTRRSDVAQLFSNSRSYFQADLSTVGDAVVFLRSLLTHKPVDELYTMLGRAKQ CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC GKTERYRTFFSHFQAHPSEQLVHADGTPGMVMVVFTLPSYPLVFKLIRDRFAYPKTMSRA CCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHH QVEGKYELVFQLDRIGRLLDAQPYRFLRFPKARFSPALLQELQTSCAMSLSEDGDDVLIA HCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH LCYVQRRLRPLNLYLREQLPEAAHAAALDYGQAIKDMARNNIFPGDMLLKNFGITRHQRA HHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCE VFYDYDELCLITECNFRDWPTPATYEEQMAAEPWFHVGPRDVFPERFALFMGLPSSQLEA EEECCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCHHHCHHHHHHHHCCCHHHHHH VKHQHPELFDPRWWRDLQSRLRDDDYPDTPPYAESRRLA HHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217