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The map label for this gene is ydbT [H]

Identifier: 21244518

GI number: 21244518

Start: 4462293

End: 4463798

Strand: Direct

Name: ydbT [H]

Synonym: XAC3794

Alternate gene names: 21244518

Gene position: 4462293-4463798 (Clockwise)

Preceding gene: 21244517

Following gene: 21244520

Centisome position: 86.22

GC content: 67.0

Gene sequence:

>1506_bases
ATGAGTGCCGTTGCACATCCCGGCAACGACGAGCAGCGCCTGCATCCATTGTCGTGGGTGTTCGTGTTGCTGCAGCAGAT
CCGTCAGTTCCTGATTCCGCTGGCCGCACTGATCCTGTTCGGCAGCCGCGACGGCAATCGCGATGTTGCCGACCAGATCG
CCACCGGCGTGGTGATTGCGGTGCTGGTGGCGATTTCGGTGCTGCGCTACTTCACCTACCGCTACCGCATCGGCAGCGAT
AGCGTGGCCATTCGCAGTGGCCTGCTGGAACGCAGCCGGCGCGATATTCCGTTTGCGCGCATCCATAACGTGGTGGTGCA
TCAATCGCTGCTGCACCGTCTGGCCGGCGTGGCCGAGGTGCGGCTGGAATCGGCCGGTGGGCACAAGCCGGAAGCGGAAA
TGCGTGTGCTGCGGCTGGATCAGGCGCTGGCGCTGGAAGATCTGATACGGCGCCGTGCAAGCGACGCAGGCATGCCGGCG
CCGCAAGTCGAAGAAGACAGCGGCAGCTTGCTGCGCCTGCCGATGGCTGAGGTCATCCGGCTGGGCCTGATCTCCAATCG
CGGCATGGTGGTGGTGGCGGCCGGCTTTGGCGTGATCTACCAGATGATTCCGCGCCGCACGGTGTCCAACTTCGTCGAGC
ATAACGGCGAGCTGGCCTATCGCTACGTCAGCCAGATCCATCCCGGCGTCGCGGTCATGGCAACGCTGGTGACCCTCGCC
ACGCTTGCCCTGTTGATGGCCATGCGCGCGCTGTCGGTCGCCCTGGCGGTGACCCAATACCACGGCTTCCATCTGAGCGA
ATCCGAGCGCCGCCTCACCGTGGAGCGCGGGCTGCTGACGCGGATCCGCAGCAGCGTGGCGTTGCGGCGGATCCAGTCGT
GGACGTTGTACGAGGGCCTGCTGCATCGCCTGTTCGGTCGTCGCCAGTTGCGGGTGGACACCGCAGTGGCCGGCACTGGC
GACACCCACGGCGGCGCATTGAAAGAACTCGCGCCCATTGCCGACCCGCAACAATGCGACGCCTTGCTGCAACGCCTGCT
GCCCGGCATCGCCTGGCCGCCGACGCAGTGGCAGACGATCGCCACGCATTGCTGGTGGCGATTGAGTCTGCCCGCCGCGC
TGATGCTGCTGCCGCTGACGGCGGGCCTGGCGTGGCAGTTCGGCAGCAAGGCCTTGTGGTTGCTGGTATGGCTGCCGTGG
AGCGCGTTCAAGGCGCAGCGCCAGGTGCAGCGCATGGCCTACGCGGTGGATGCGCGTTACGTTGCCGTACGCGGCGGCTG
GTGGAAGCGCTGGTGGCGGCTGGCCGAGCTGGACAAGCTGCAGGCGCTGCAACTGCAACGCTCGCCGCTGGATCGGCTCT
CCGGCACCGCCACGCTATGGCTGGATACGGCCGGCGCCAGCGCCACCGGCCCGGCATTGCGGCTGCGGTTTGTGCCGTTT
GCGCAGGCGCAGGCGCTGCAGGCGCAACTCGGTGCCGCGTTGGCACGGCGCAAACTGCGCTGGTGA

Upstream 100 bases:

>100_bases
GCCGGCTCAACGCGGTGGCGCTGTCGGGGCTGGATCAGGACGATGCCGAGCGCCTGCGCGACCGCCTGGCCCGCCAGCTC
GATCACGACGACGACGCGCT

Downstream 100 bases:

>100_bases
TCACCGCCGGCGATCAGTCATGGTGCTGATCCGTCTTTGGTGATCTGCGGTTGTGCTGGTCGAGTGGGCCACTCGGTTTC
GTGATCCGATCATTGACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSAVAHPGNDEQRLHPLSWVFVLLQQIRQFLIPLAALILFGSRDGNRDVADQIATGVVIAVLVAISVLRYFTYRYRIGSD
SVAIRSGLLERSRRDIPFARIHNVVVHQSLLHRLAGVAEVRLESAGGHKPEAEMRVLRLDQALALEDLIRRRASDAGMPA
PQVEEDSGSLLRLPMAEVIRLGLISNRGMVVVAAGFGVIYQMIPRRTVSNFVEHNGELAYRYVSQIHPGVAVMATLVTLA
TLALLMAMRALSVALAVTQYHGFHLSESERRLTVERGLLTRIRSSVALRRIQSWTLYEGLLHRLFGRRQLRVDTAVAGTG
DTHGGALKELAPIADPQQCDALLQRLLPGIAWPPTQWQTIATHCWWRLSLPAALMLLPLTAGLAWQFGSKALWLLVWLPW
SAFKAQRQVQRMAYAVDARYVAVRGGWWKRWWRLAELDKLQALQLQRSPLDRLSGTATLWLDTAGASATGPALRLRFVPF
AQAQALQAQLGAALARRKLRW

Sequences:

>Translated_501_residues
MSAVAHPGNDEQRLHPLSWVFVLLQQIRQFLIPLAALILFGSRDGNRDVADQIATGVVIAVLVAISVLRYFTYRYRIGSD
SVAIRSGLLERSRRDIPFARIHNVVVHQSLLHRLAGVAEVRLESAGGHKPEAEMRVLRLDQALALEDLIRRRASDAGMPA
PQVEEDSGSLLRLPMAEVIRLGLISNRGMVVVAAGFGVIYQMIPRRTVSNFVEHNGELAYRYVSQIHPGVAVMATLVTLA
TLALLMAMRALSVALAVTQYHGFHLSESERRLTVERGLLTRIRSSVALRRIQSWTLYEGLLHRLFGRRQLRVDTAVAGTG
DTHGGALKELAPIADPQQCDALLQRLLPGIAWPPTQWQTIATHCWWRLSLPAALMLLPLTAGLAWQFGSKALWLLVWLPW
SAFKAQRQVQRMAYAVDARYVAVRGGWWKRWWRLAELDKLQALQLQRSPLDRLSGTATLWLDTAGASATGPALRLRFVPF
AQAQALQAQLGAALARRKLRW
>Mature_500_residues
SAVAHPGNDEQRLHPLSWVFVLLQQIRQFLIPLAALILFGSRDGNRDVADQIATGVVIAVLVAISVLRYFTYRYRIGSDS
VAIRSGLLERSRRDIPFARIHNVVVHQSLLHRLAGVAEVRLESAGGHKPEAEMRVLRLDQALALEDLIRRRASDAGMPAP
QVEEDSGSLLRLPMAEVIRLGLISNRGMVVVAAGFGVIYQMIPRRTVSNFVEHNGELAYRYVSQIHPGVAVMATLVTLAT
LALLMAMRALSVALAVTQYHGFHLSESERRLTVERGLLTRIRSSVALRRIQSWTLYEGLLHRLFGRRQLRVDTAVAGTGD
THGGALKELAPIADPQQCDALLQRLLPGIAWPPTQWQTIATHCWWRLSLPAALMLLPLTAGLAWQFGSKALWLLVWLPWS
AFKAQRQVQRMAYAVDARYVAVRGGWWKRWWRLAELDKLQALQLQRSPLDRLSGTATLWLDTAGASATGPALRLRFVPFA
QAQALQAQLGAALARRKLRW

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 55893; Mature: 55762

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVAHPGNDEQRLHPLSWVFVLLQQIRQFLIPLAALILFGSRDGNRDVADQIATGVVIA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VLVAISVLRYFTYRYRIGSDSVAIRSGLLERSRRDIPFARIHNVVVHQSLLHRLAGVAEV
HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLESAGGHKPEAEMRVLRLDQALALEDLIRRRASDAGMPAPQVEEDSGSLLRLPMAEVIR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHH
LGLISNRGMVVVAAGFGVIYQMIPRRTVSNFVEHNGELAYRYVSQIHPGVAVMATLVTLA
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
TLALLMAMRALSVALAVTQYHGFHLSESERRLTVERGLLTRIRSSVALRRIQSWTLYEGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHRLFGRRQLRVDTAVAGTGDTHGGALKELAPIADPQQCDALLQRLLPGIAWPPTQWQTI
HHHHHCCCEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
ATHCWWRLSLPAALMLLPLTAGLAWQFGSKALWLLVWLPWSAFKAQRQVQRMAYAVDARY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEE
VAVRGGWWKRWWRLAELDKLQALQLQRSPLDRLSGTATLWLDTAGASATGPALRLRFVPF
EEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCCCCEEEEEECCH
AQAQALQAQLGAALARRKLRW
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAVAHPGNDEQRLHPLSWVFVLLQQIRQFLIPLAALILFGSRDGNRDVADQIATGVVIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VLVAISVLRYFTYRYRIGSDSVAIRSGLLERSRRDIPFARIHNVVVHQSLLHRLAGVAEV
HHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLESAGGHKPEAEMRVLRLDQALALEDLIRRRASDAGMPAPQVEEDSGSLLRLPMAEVIR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHH
LGLISNRGMVVVAAGFGVIYQMIPRRTVSNFVEHNGELAYRYVSQIHPGVAVMATLVTLA
HHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
TLALLMAMRALSVALAVTQYHGFHLSESERRLTVERGLLTRIRSSVALRRIQSWTLYEGL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHRLFGRRQLRVDTAVAGTGDTHGGALKELAPIADPQQCDALLQRLLPGIAWPPTQWQTI
HHHHHCCCEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
ATHCWWRLSLPAALMLLPLTAGLAWQFGSKALWLLVWLPWSAFKAQRQVQRMAYAVDARY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCEE
VAVRGGWWKRWWRLAELDKLQALQLQRSPLDRLSGTATLWLDTAGASATGPALRLRFVPF
EEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCCCCEEEEEECCH
AQAQALQAQLGAALARRKLRW
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]