Click here to switch to the map view.

The map label for this gene is ydbS [H]

Identifier: 21244517

GI number: 21244517

Start: 4461820

End: 4462296

Strand: Direct

Name: ydbS [H]

Synonym: XAC3793

Alternate gene names: 21244517

Gene position: 4461820-4462296 (Clockwise)

Preceding gene: 21244516

Following gene: 21244518

Centisome position: 86.21

GC content: 69.18

Gene sequence:

>477_bases
GTGACGCACAGCCAGTGGCAGTCGCTGCCGCGTCGCGGTGCGTATGTGGCGGCGATCAATGGCACGCTCGGCGGCGGATG
TGCGGGCCTGATCACAGCCAGTGTCACGGTTGTCTGGCTGCACGCCTGGCGTTACTGGCCGGCGGTGCTGGGCGTGACCG
CGGTCATCGCCCTGCTGGGCGCCTGGTTGGCGGTCAAACGGCACCGGCTGACGCAATGGCAACTCGATCAGCATGGCCTG
GCGCTACAGCGCGGTCATCTGTGGCAAAGCGATACGCGCGTTCCGATTTCGCGCGTGCAGCATGTGGACCTGCGCCGCGG
GCCGATCGAACGCGCGACCGGCCTGACCACGCTGGTGGTACACACCGCCGGCAGCCGGCTCAACGCGGTGGCGCTGTCGG
GGCTGGATCAGGACGATGCCGAGCGCCTGCGCGACCGCCTGGCCCGCCAGCTCGATCACGACGACGACGCGCTATGA

Upstream 100 bases:

>100_bases
CTATGCTTGCGCATCGCTTCTGCAGGCCCGCCTCGTGCACGACGCTCCACCGCCGCACCCCGACGTCTTGGTCCAGCCCG
CTCCGGCAGAAGCCCCAGCC

Downstream 100 bases:

>100_bases
GTGCCGTTGCACATCCCGGCAACGACGAGCAGCGCCTGCATCCATTGTCGTGGGTGTTCGTGTTGCTGCAGCAGATCCGT
CAGTTCCTGATTCCGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTHSQWQSLPRRGAYVAAINGTLGGGCAGLITASVTVVWLHAWRYWPAVLGVTAVIALLGAWLAVKRHRLTQWQLDQHGL
ALQRGHLWQSDTRVPISRVQHVDLRRGPIERATGLTTLVVHTAGSRLNAVALSGLDQDDAERLRDRLARQLDHDDDAL

Sequences:

>Translated_158_residues
MTHSQWQSLPRRGAYVAAINGTLGGGCAGLITASVTVVWLHAWRYWPAVLGVTAVIALLGAWLAVKRHRLTQWQLDQHGL
ALQRGHLWQSDTRVPISRVQHVDLRRGPIERATGLTTLVVHTAGSRLNAVALSGLDQDDAERLRDRLARQLDHDDDAL
>Mature_157_residues
THSQWQSLPRRGAYVAAINGTLGGGCAGLITASVTVVWLHAWRYWPAVLGVTAVIALLGAWLAVKRHRLTQWQLDQHGLA
LQRGHLWQSDTRVPISRVQHVDLRRGPIERATGLTTLVVHTAGSRLNAVALSGLDQDDAERLRDRLARQLDHDDDAL

Specific function: Unknown

COG id: COG3402

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 17456; Mature: 17325

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSQWQSLPRRGAYVAAINGTLGGGCAGLITASVTVVWLHAWRYWPAVLGVTAVIALLG
CCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWLAVKRHRLTQWQLDQHGLALQRGHLWQSDTRVPISRVQHVDLRRGPIERATGLTTLVV
HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEE
HTAGSRLNAVALSGLDQDDAERLRDRLARQLDHDDDAL
ECCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
THSQWQSLPRRGAYVAAINGTLGGGCAGLITASVTVVWLHAWRYWPAVLGVTAVIALLG
CCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWLAVKRHRLTQWQLDQHGLALQRGHLWQSDTRVPISRVQHVDLRRGPIERATGLTTLVV
HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCEEEEE
HTAGSRLNAVALSGLDQDDAERLRDRLARQLDHDDDAL
ECCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]